Triticum aestivum (bread wheat): 123079431
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Entry
123079431 CDS
T07757
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123079431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
taes04121
]
123079431
03036 Chromosome and associated proteins [BR:
taes03036
]
123079431
Enzymes [BR:
taes01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123079431
Ubiquitin system [BR:
taes04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123079431
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
123079431
Noncanonical PRC1 (PRC1.1)
123079431
Noncanonical PRC1 (PRC1.3/1.5)
123079431
Noncanonical PRC1 (PRC1.6)
123079431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_6
zf-UDP
zf-rbx1
TRAF3_RING
zf-Nse
zf-C3HC4_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123079431
NCBI-ProteinID:
XP_044358136
LinkDB
All DBs
Position
3D:complement(434980512..434987202)
Genome browser
AA seq
653 aa
AA seq
DB search
MSGTTLRQIERHGMEVRLPSALSPRRCLLQSEEAEPSRSTAGEAACMSLASLAAGLAPPW
SPAQFPRPNSQTAVEGGDPSSRPHTPHAVYTTEHNASTHPSIHPQFLIYFPVLLSLSPPS
RPAPTWPGHLPPLPPVVPSSPSTATSPAPPQTPREGRHRRAAGIRGPGSYARMPAQKRQL
PSPSSSSKPRDHVEANGADAPSAVAAGGGGGGLHPVPGGGAANRATDPQPQPQRAGDSGA
MSGGGGGAYSDSESSESDGDMDEFVLVKLAEVRKEVQCPICLGIIRKTRTVMECLHRFCR
DCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIATLYPDIDKYEEEELAFGEEERT
RNKKIQATIEEMIRKQSEALGKKRPTAKATANAFARKYRRNVRTRGRGRTVARDIAPTGS
DDEDREEENANVESKELPSPDNHSPDSRQKRGRKRPAPTPSPARTIGSSDHGSEENDEVV
SLKEGFTTSPLRGEMLAWGKNGTRSQTRYNNVGGTNGRLGKGGRFAKFVDHLRATDENKE
FNLYLVLLPLDGQTTPNLEKPYLSCRPRVSIRHLLQFIALQLSRQVEELEMYIRVDLHNR
SVAVKDSGSAETKLSLFDGLERLREDKLLLDLHPSFASGNGDLELIYALKRQD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaacaaccttacgccaaatcgagcggcatggaatggaagtacggctgccctcc
gctttgtccccacgcaggtgcttgctacagtcggaggaagcggagcccagcagaagcacg
gcaggcgaggcggcgtgcatgtccttggcgtcgctcgctgccggcctcgcccctccctgg
tctcccgcccagttccccaggccaaacagtcagaccgcggtggagggaggcgacccgagc
agcaggccccacacgccacacgcagtatacacgaccgagcacaacgcgagcacgcatcca
tccatccatccccagttccttatttattttccggtcctcctctctctttctccgccctcc
cgtcccgcacccacctggcctggccacctccctcctctccctccagtcgtcccgtcctcc
ccgtcgaccgccacatcccccgcccctccccagacgcctcgcgagggccgccaccgccgc
gccgccgggatccgcgggccgggatcctacgccagaatgcccgcgcagaagcgccagctc
ccctcgccatcgtcctcctccaaaccccgcgaccacgttgaggcgaacggggcggacgct
ccctcggccgtcgccgccggtgggggaggaggagggctccatccggtcccgggcggaggc
gccgccaatcgggcgaccgacccgcagccgcagccgcagcgcgcaggcgattcgggcgcg
atgagcggcggcggcggcggcgcgtacagcgacagcgagtcgtcggagagcgacggcgac
atggacgagtttgtgctcgtgaaattagcagaagtccgaaaagaagtccagtgcccaatc
tgtttaggcattatccggaagacaagaacggttatggaatgtttgcaccgattctgcagg
gattgcattgataaatctatgaggctaggaaataatgagtgtccagcatgccgtactcat
tgtgcaagtcgacgttctttgagggatgatcctaattatgatgcacttattgcaaccttg
tatccagatattgataagtacgaggaagaggaacttgctttcggtgaagaggagaggact
cggaataagaagattcaagcaaccatcgaggagatgattcgaaagcagtcggaggccctc
ggtaagaagcgtcctacggcaaaagctactgccaatgcttttgcaaggaagtacaggaga
aatgtgcgtacccgtgggagaggtagaacggttgctcgtgatattgcccctactggctct
gatgatgaggacagagaagaagaaaatgctaatgttgagagcaaagagttgccttctcct
gataaccactctccagattcaaggcagaaaagaggtagaaaaaggcctgcaccaacacct
tctcctgctagaaccattggcagtagtgaccacggatctgaggagaatgacgaagtagta
tctctaaaagaaggtttcaccacctctccattgcggggtgagatgctcgcatggggaaaa
aatggcacaagaagccaaactcggtacaacaatgttggtggaacaaacggcaggctgggg
aagggtgggcgtttcgcgaagtttgtggaccacctccgtgcaactgatgaaaacaaggag
ttcaacttgtatcttgttcttcttcctcttgatggacaaacaacgcctaacttggaaaag
ccctatctaagttgtcgaccaagggtgtccattcgacatcttctacagttcattgctctt
cagttgtctcggcaagttgaagaacttgagatgtatataagggtggacctccacaataga
agtgttgcagtgaaggactctgggtctgctgagacaaaactgtctctctttgatggcttg
gaaagattgagggaagacaagcttctgttggaccttcacccttcatttgcctctggtaat
ggtgatctggaattgatatatgctttgaaacgccaagactag
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integrated database retrieval system
