KEGG   Triticum aestivum (bread wheat): 123082164
Entry
123082164         CDS       T07757                                 
Name
(RefSeq) histone deacetylase 2-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03082  ATP-dependent chromatin remodeling
taes03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123082164
   03083 Polycomb repressive complex
    123082164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:taes03036]
    123082164
Enzymes [BR:taes01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     123082164
Chromosome and associated proteins [BR:taes03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     123082164
   HDAC complexes
    Sin3A-HDAC complex
     123082164
    BRAF-HDAC complex
     123082164
    REST complex
     123082164
    SHIP complex
     123082164
    MiDAC complex
     123082164
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     123082164
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    123082164
  Chromatin remodeling factors
   NuRD complex
    123082164
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 123082164
NCBI-ProteinID: XP_044360491
LinkDB
Position
4A:510343437..510345229
AA seq 473 aa
MDMGANSLPSPSCPDGRKRRVCYYYDPGISNVDYGKGHSMVPRRVAMTHGLVASYGLLND
MTRLRTRPASPEELLAFHDQKYVDLLGRLTPAAYISDGDLRRTAEEHGIGPVRRWDDGAC
TNDNPVIDGLMEYCLSYAGGSLAAARALCGGDHDVAINWSGGMHHACRGHANGFCYVNDI
VLAIKQLLGRFRRVLYVDIDAHHGDGVEKAFADSNQVMTLSFHQYQTDFFPGTGSIDDVG
DGAGRYHALNVPLKKGMDDQGYHELFKPIVGKAMQVFQPDAVVLQCGADSLSGDRLAGLE
LSVGGHAECVRYLRGFNAPLLLLGGGGYTINHVASCWCYETAVAVGKEDEIADEIPHHPY
DHYYRSQGYKLQCRTEAPGSLSSGENKDAAAIRVKALEHLSAINCAPSIQFHEPCGAAAQ
GMDVDDLCHDDDNDEEEEEDPMERLQRLCDNADLAGFFVELGRKHRLSSSAMV
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggatatgggcgccaactcgctgccgtcgccgtcgtgccccgacggccggaagcggcgc
gtgtgctactactacgacccgggcatctccaacgtcgactacggcaagggacactccatg
gtgccccgccgcgtcgcgatgacccacggcctcgtcgcctcctacggcctcctcaacgac
atgactcgcctccgcaccaggcccgccagcccggaggagctcctcgcgttccacgaccag
aaatacgtcgacctcctcggcaggctcacccccgccgcgtacatcagcgacggcgatctc
cggcggacggccgaggagcacggcatcggccccgtgcgccgctgggacgacggcgcctgc
acgaacgacaaccccgtcatcgacggactcatggagtactgcctgagctacgccggcggg
tcgctggccgcggcgcgcgcgctctgcgggggcgaccacgacgtcgctatcaactggtcc
ggcggcatgcaccacgcgtgccggggccacgccaacggcttctgctacgtgaacgacatc
gtgctcgccatcaagcagctcctcggccgcttccggcgggtgctgtacgtggacatcgac
gcgcaccacggggacggcgtggagaaggccttcgcggactccaaccaggtgatgacgctg
tccttccaccagtaccaaaccgatttcttccccggcaccgggagcatcgacgacgtcggc
gatggggccggcaggtaccacgccctcaacgtgccgctcaagaagggcatggacgaccag
gggtaccatgagctgttcaagccgatcgtgggcaaggccatgcaggtgttccagccggac
gccgtggtgctgcagtgcggcgccgactcgctctccggcgaccggctcgccggcctcgag
ctgtcggtgggcggccacgcggagtgcgtcaggtacctgcggggattcaacgcgccgctg
ctcctcctcggcggcggcggctacaccattaaccacgtcgcctcctgctggtgctacgag
acggcggtggccgtgggcaaggaagacgagatcgccgacgagataccacaccatccgtac
gatcactactacaggagccagggttacaagctccagtgtcgcacggaggcgcccggcagc
ctcagcagcggggagaataaggacgcggccgccattagggtgaaagccctggagcacctc
tcggcgatcaactgcgccccgagcatacagttccacgagccatgcggcgcggcggcccaa
ggcatggacgtcgacgacctctgccacgacgacgacaacgatgaagaagaagaagaagac
ccaatggagaggctgcagcggctgtgcgacaacgcggacctcgccgggtttttcgtggag
ttggggcggaagcacagactatcgtcctctgccatggtttga

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