Triticum aestivum (bread wheat): 123085080
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Entry
123085080 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123085080
03420 Nucleotide excision repair
123085080
03430 Mismatch repair
123085080
03440 Homologous recombination
123085080
03460 Fanconi anemia pathway
123085080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123085080
03032 DNA replication proteins [BR:
taes03032
]
123085080
03400 DNA repair and recombination proteins [BR:
taes03400
]
123085080
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123085080
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123085080
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123085080
MMR (mismatch excision repair)
123085080
DSBR (double strand breaks repair)
HR (homologous recombination)
123085080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
123085080
NCBI-ProteinID:
XP_044362596
UniProt:
A0A3B6HNK0
LinkDB
All DBs
Position
4A:complement(48536093..48539722)
Genome browser
AA seq
622 aa
AA seq
DB search
MDAKSVTPSAVALILANPTPESPDDVPEIVVQVLDLKPIGSRFTFMASDGEAKVKAILST
HFASEVHSGKLQNLGLVRILNYTCNDIPQKTDKMVIITKCEVVSQALDAEIKSEVKIEEP
SVLMKPKEEAAGLSKPIGAAPATIMLKPRHDVKSASQIVSEQRGNAAPAARLAMTRRVHP
LISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEAAKKF
YPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLNETAVVEEAEGESFIPPVQYNFVKI
DMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTISLWNDL
ATTVGEELLDMVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEAEKLRAWYESE
GKGTTLASVGAGMGASNAGGLRSMYSDRVFLSHITSDPNLGQDKPVFFSLYANISNIKPD
QTMWYRACTTCNKKVTEALGSGFWCEGCQKNYERCSLRYTMVIKVSDPTGEAWLSLFNDQ
AERIVGCSADELDRIRKEEGDDMFQLKLKEATWIPHLFRVSVVQNEYMGEKRQRITVRSE
SPVDYSAEARYQLEEIAKLTSS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagtcggtgacgccgagcgccgtggccctcatcctcgccaaccccacgccg
gagtcgcccgacgacgtgccggagatcgtcgtgcaggtcctcgacctcaaacccatcggc
tcccgcttcactttcatggccagcgacggggaggcgaaggtcaaggcgatcctctccacc
cacttcgcgtcggaggtccactccggcaagctccagaacctcggcctcgtccgcatcctc
aactacacatgcaacgacatcccacaaaagacggacaagatggtgatcatcaccaagtgc
gaggtcgtgtcccaggctcttgacgccgagatcaagagcgaggtcaagatagaagagcca
tcggttctcatgaagcccaaggaggaggctgcgggtctctccaagcccattggcgccgcc
ccggctacgattatgctgaagccaaggcacgacgtgaagtccgcgtcccagattgttagc
gagcagcgcggaaatgctgctcccgctgctcgcttggccatgacgaggcgggtgcatcct
ctgatctccctcaacccctaccagggcaactgggtcatcaaggtgcgggtcacaagcaag
ggcaacctcaggtcatacaggaatgcccgtggagaaggccatgtcttcaacgtagagctc
actgacgaggatggcacccagatccaggccaccatgttcaatgaggctgcaaagaagttc
tatcctgtgtttgagttggggaaggtctactacatctccaagggttcactcagaatcgcg
aacaagcagttcaagacagtccagaatgactatgagatgaccctgaatgagactgctgtt
gttgaagaggctgagggggaatctttcattccaccagtgcaatacaactttgtcaagatt
gatatgctggggccatatgttggtggcagggagttagtagatatcattggtgttgttcag
agtgtatcacctaccctgagcatcagaagaaagattgacaatgagtcaatcccaaagcgt
gacattgttgttgcagatgactcgaacaaaactgtcaccatttctctttggaatgatctt
gccaccactgttggtgaggaactcttggacatggttgactctgcacctatcattgcagtg
aagagcctgaaagtatctgactttcaaggtgtgtctgtttctacagtaggcaaaagcaca
cttgtgattaacccagagttgcctgaggctgagaagcttagagcttggtatgaatctgaa
ggcaagggtactaccttggcatcagttggtgctggaatgggtgcatccaacgctggtggc
ttgagatcaatgtactctgacagagtttttctgtctcacatcacaagtgaccctaacttg
ggccaggacaagcctgttttcttcagcctgtatgccaacataagcaacattaagcctgac
cagaccatgtggtaccgtgcttgcaccacctgcaacaagaaggtgactgaggcgctcgga
tcaggattctggtgtgaagggtgccagaagaactatgagcggtgctcattgaggtacacc
atggtgatcaaggtctctgatcccactggcgaggcctggctgtctcttttcaatgaccaa
gcagagagaattgttggctgcagcgcagatgagcttgatcggatcaggaaagaggagggt
gatgacatgttccagctcaagctgaaggaagcgacctggattccccacctgttccgtgtc
agcgtggtgcagaacgagtacatgggtgagaagaggcagaggatcaccgtgaggagtgag
tcgccggtcgactactctgctgaagcaaggtaccagcttgaggagattgccaagctcacc
tccagctag
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