Triticum aestivum (bread wheat): 123085934
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Entry
123085934 CDS
T07757
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123085934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123085934
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123085934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
PRP4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_SCAP
Beta-prop_NWD2_C
WD40_like
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
123085934
NCBI-ProteinID:
XP_044363578
LinkDB
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Position
4A:264169978..264174941
Genome browser
AA seq
509 aa
AA seq
DB search
MSMEIPRPLPPAITPPMAPHPVHPPIAPIPIPVTPSTSAAADDDEVDYEVSDDHRAARER
HERAVQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEREMERRDRLRALMVRLEA
DGQFDRLLRAQEDEQGAPGDDDDMEQIQYPFFTEGTNQLLQARVDIAMYSLPRAKARVDS
AKRRLAGPDEDPEAEAALVVKQAGDFVLECSEIGDDRPLTGCSFSRDASMLATSSWSGII
KVWSMPQITKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNRDGSLLMSFDGHLD
RLARVAFHPSGKYLGTASFDKTWRLWDINTGTELLLQEGHSRSVYGVSFHPDGSLAASCG
LDANARVWDLRSGRLYCTLIGHVKPVLGVSFSPNGHLVATASEDNFCRIWDLRTRQMVYS
IPAHKSLISHVKFEPQEGYYLATSSYDSKAALWSTRDYKPIKSLAGHESKVTSLDISGDG
QHIVTVSHDRTIKIWSCRGTARDNEMELD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggagatccccaggccgctcccccctgccatcacccctcccatggctccccac
cccgtccacccgcccatcgctccgatccccatccccgtcacaccctccacatccgccgct
gccgacgatgacgaggtcgactacgaggtctccgacgaccaccgcgccgcgcgggagcgc
cacgagcgcgccgtacaggagctactgcagcgccgacgcgcctacgccatggccgtgccc
accaacgactccgccgtgcgcgcgcgcctccgccgtctcggcgagcccatcacgctcttc
ggcgagcgcgagatggagcgccgcgaccgcctacgcgcactcatggtccgcctcgaggcc
gacggccagttcgaccgcctcctccgcgcgcaggaggacgagcagggagccccgggcgac
gacgacgacatggagcagatccagtaccctttcttcaccgaggggaccaaccaactgctt
caggcgcgcgttgatatagctatgtactcgctgccccgcgctaaggccagggtcgacagt
gccaaacgccgcctggctggccccgacgaggaccccgaggcagaggccgcccttgttgtc
aagcaggcgggggacttcgtgcttgagtgcagcgagattggagatgaccgcccgctcacc
ggttgctccttctcccgcgatgcctcaatgctcgccacaagctcctggagcgggatcatc
aaagtatggagcatgccacagataactaaaattgcaaccctgaaaggtcatacagaacgt
gcaactgatgttgccttctctccagttgataactgcttagcgacagcctcagctgataaa
actgccaaattatggaacagagatgggtcactcctaatgtcttttgatggtcacctggac
cgtcttgctcgcgttgcttttcatccatctggaaagtaccttggtacagctagctttgac
aagacctggagattgtgggacatcaatactggaactgaacttctactccaagagggacat
agcagaagtgtatatggtgttagctttcatccagatggttctttagctgcatcttgtggg
cttgatgcgaatgctcgagtttgggatctaaggtcaggaagattgtactgtaccctcatt
ggacatgtgaaacctgtcctaggagtcagcttctcccctaatggtcatctagttgcaact
gcaagtgaagacaatttctgtcgaatatgggatttgaggaccagacaaatggtatactct
ataccggcacataagagtctcatctcgcacgtgaaatttgaaccccaggagggttattat
ttagcgacatcttcctatgacagtaaagcagcgctatggtcaactcgggattacaaacca
attaaaagcttggcaggccatgagtcaaaggttactagtctggatattagtggagatgga
caacacattgtgactgtttcacatgatagaactataaagatctggtcatgcagaggcaca
gcgcgggataacgagatggagttggattaa
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