Triticum aestivum (bread wheat): 123085981
Help
Entry
123085981 CDS
T07757
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123085981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123085981
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123085981
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123085981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
AAA_19
AAA_30
AAA_16
Cas3-like_C_2
nSTAND3
TsaE
ABC_tran
Flavi_DEAD
Sigma54_activ_2
PhoH
Motif
Other DBs
NCBI-GeneID:
123085981
NCBI-ProteinID:
XP_044363620
UniProt:
A0A3B6HVW2
LinkDB
All DBs
Position
4A:complement(288377039..288381702)
Genome browser
AA seq
1234 aa
AA seq
DB search
MAPAAGEGPGDDGLRKLEYLSLVSKVCSELETHIGVGDKVLAEFITELGRDAPSVADFDA
KLKANGADLPDYFVRTLLTIIHAILPPPSHNPSSAASQSNSKYRALSRPDDADRARELRL
ELERDANATAATTPAPSRDRSRDDRSRDRDHDRTRDERGRDRDHGRSRDRDRGRGDCSHN
RDRAHDDRGQDRNHDRGCEHDHGWDRDRDRGRDRDREGDRDGNGRRAQDRLQQRDRDTGK
AHGRSRRYVDEEEGQQERAGGRKTENTLTNSSGEPELYQVYRGRVTRVMDTGCFVKLEDV
RGGREGLVHVSQMASRRITNAKEVVKRDQEVFVKVVSVKGDKLSLSLRDVDQDTGKDLLP
MQRGVEDAPRTNPSVGSAAAAGSGRRLGLSGIVITEEDEVAPISRRPLKRMSSPERWEAK
QLIASGVLDVRDYPQFDEDGDGMLYQEEGAEEELEIELNEDEPEFLQGQSRFSIDMSPVK
IFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQ
ELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQDQRQTLPIYKLKKELIQAVHDNQVL
VVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGY
AIRFEDCTGPETVIKYMTDGMLLREILVDENLSQYSVVMLDEAHERTIHTDVLFGLLKQL
VKRRPDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITV
LQIHLTEPEGDILVFLTGQEEIDHACQCLYERMKGLGKDVPELIILPVYSALPSEMQSKI
FEPAPPGKRKVVVATNIAEASLTIDGIYYVIDPGFAKINVYNSKQGLDSLVITPISQASS
KQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGSTVLNMKAMGINDLLSFD
FMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDE
ILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFE
NFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFMKIRKAITAGFFFHAARKDPQEGY
RTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFYKGA
DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcggcgggggagggtcccggcgacgatgggctccgaaagttggagtacctg
tcgctcgtctccaaggtctgctcggagctggagacgcacatcggtgtaggcgacaaggta
ctggctgagttcattaccgagctcggccgcgacgccccctcggtcgccgatttcgacgcc
aagctcaaggccaacggcgccgacctccccgactacttcgtccgcacgctcctcaccatc
atccacgccatcctcccgccgccctcccataaccctagctccgccgcctcgcagtccaac
tccaagtaccgcgcgctctcgcgccccgacgacgcagatcgcgcccgcgagctccgcctc
gagcttgagcgtgatgccaatgccacagcggcgaccacccctgccccttccagggaccgc
agtcgcgatgaccgctctcgggaccgtgaccatgaccgcacgcgtgatgaacgcggacgg
gatcgtgaccatggccgcagtcgtgacagagaccgcgggcgtggtgattgcagccataac
cgtgaccgagcacatgatgaccgtggccaggatcgtaaccatgaccgaggctgtgaacat
gatcatggctgggacagggatcgagaccgtggtcgcgacagagaccgggagggagatcgg
gacggtaatggtcggagggcccaggaccgcctccagcaaagggacagggatactggcaag
gcccatggaaggagcaggaggtatgtggatgaggaggagggacagcaggaaagggctgga
ggaaggaagacagagaataccctgacaaattcaagtggcgagcctgagctttaccaggtg
tacagggggagggtgacccgtgtaatggacaccggttgctttgtcaagcttgaggatgtt
cgtggtggccgtgagggacttgttcatgtatcgcagatggcaagcagacggataaccaat
gcaaaggaggtggtgaagcgtgatcaggaggtgttcgtgaaggtagtttcggtaaaggga
gataagttgagtctctcactgagggatgtggatcaggatacaggaaaggaccttctgcca
atgcagcgtggtgtggaggatgctccaaggactaacccatctgttggtagtgctgctgct
gctgggtctggaaggaggttgggtctatcggggattgtgattacagaggaggatgaggtt
gcacccatctcgcggcgtcccctcaagcggatgagctcaccggagaggtgggaagcgaag
cagctaattgcttcgggtgttctcgatgtgagggattacccacagtttgatgaggatggt
gatggaatgttgtatcaggaggaaggcgcagaggaggagttggagattgagcttaatgag
gatgaaccagagttcttgcagggacaaagcagattctcaattgacatgtcacctgttaag
attttcaagaatccagagggttcattaagtcgagcagcagctctccagactgccctcatc
aaggagcgccgtgaggttagagaacaagagcagagagcaatgctggactcgatacccaag
gatctgaataggccatgggaggacccaatgcccgacacaggtgagcgacaccttgcacag
gagcttagaggtgttggtctatcagcttatgacatgccagaatggaagaaggaagcatat
ggaaaagctttaacgtttgggcaaaggtcaaagctttcaatacaagatcagaggcaaact
cttccaatatacaagttgaagaaagagttgattcaagctgtgcatgataatcaagtttta
gttgttatcggagaaactggctctggaaagacaacgcaggtgacacaatatttggctgaa
gctggttataccacaaggggtaaaattggctgtactcaacctcgtagggtggctgcaatg
tctgttgcaaagagagtggcagaagaatttggctgtcgactgggagaggaagttggttat
gccattcgctttgaggattgcactggcccagaaactgtgataaaatacatgaccgatgga
atgcttctgcgtgaaattttagttgatgagaacctttcccagtattcagtagtcatgctt
gatgaagcgcacgaaaggaccatccacacagatgttctcttcggtttgctaaagcagctt
gttaagcgtagacctgacatgaggcttattgttacttctgctacccttgatgctgaaaag
ttctctgggtatttcttcaactgcaacatcttcacaattccgggaagaacattcccagtg
gagatactctacaccaaacaaccagaaagtgactacttggatgctgcattgattaccgtg
ctgcagatccacttgacagagccagagggtgatatccttgttttcttgactggtcaagag
gagattgatcatgcctgtcaatgtttatatgagaggatgaaagggctgggaaaggatgtt
cctgagctcataattttgcctgtgtatagcgctctgcctagtgaaatgcagtcaaagatc
tttgagccagctccacctgggaagaggaaggtggtcgtagccaccaatattgctgaagct
tctttaaccattgatggcatatattatgtcatcgaccctggcttcgccaaaatcaatgtt
tataattcaaaacaagggcttgattcattggtcatcactccaatctcacaagcatcgtca
aaacaaagagcagggcgtgctggccgtactggaccaggcaaatgttatcgtctatacact
gaaagtgcttaccgcaatgaaatgtcaccaacgacgattccagaaattcaaaggatcaat
ttgggctctacagttcttaatatgaaggcaatggggataaatgacctactatcctttgat
tttatggaccccccagcaccccaagcacttatctctgctatggaacagctttacagcctt
ggcgctcttgatgaggagggccttcttaccaaactgggaagaaaaatggctgaatttcca
ctggatccaccactttcaaagatgctactagctagcgtcgaccttggatgcagtgatgag
atactgactattatagcgatgattcaaacggggaatattttctataggcctagagaaaaa
caggctcaagctgatcagaaaagggccaaatttttccagccagagggagatcatcttacc
ctacttgctgtatatgaggcttggaaagcaaagaacttttcagggccctggtgctttgag
aactttgttcagtcaagatcgctaaggagagcacaagatgtcagaaagcagcttctaact
atcatggatagatataagttggatgttgtcgctgctgggaagaacttcatgaaaataagg
aaagcaatcactgccggcttctttttccatgctgccaggaaagatccccaggaaggctac
agaaccttggtggagaaccagccagtgtacattcacccaagcagtgcgctgttccagcgc
caaccagattgggtcatttaccacgagcttgtaatgacgaccaaggagtatatgagggag
gtgaccgtggttgacccgaaatggttagtggagttagcgccaagattctacaagggcgca
gatccaaccaagatgagcaagaggaagcgacaggaaaggattgagcctctgtacgacagg
taccacgagcccaactcatggcgtctcagcaagcgccgagcttga
DBGET
integrated database retrieval system
