Triticum aestivum (bread wheat): 123086075
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Entry
123086075 CDS
T07757
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123086075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123086075
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123086075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
123086075
NCBI-ProteinID:
XP_044363719
UniProt:
A0A3B6HSA6
LinkDB
All DBs
Position
4A:345260436..345265059
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AA seq
570 aa
AA seq
DB search
MDLLQSSYAPGDASSPEDESLSSPDTSPLRLPSKSAAPAVDETALALSAAATSTSRPIDP
SLHLIPFNPTADQLWAPVLGPQHPHAPISSASGHRNHKLGHVEDAALLPFLFDEQYNTFH
RFGYASDPSGLHIIGDAQPQAPDLDTVYNLPPSEHKRRRIQSREENHEPLPPEAQNPASD
EWVVHNKKSPWAGNREGPPVELTDEQRQYAEAHAAKKAEKEARGEGKEKTEVVVKSTFHG
KEEKDYQGRSWITPPKDAKATNERCYIPKRCVHEWVGHTKGVSAIRFSPKYGHLLLSASM
DCKIKIWDVLESKTCMRTYMGHSKAVRDISFSNDGSKFLSAGYDRNIQYWDTETGQVIST
FSTGKVPYVVKLNPDEDKQHILLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFVDN
NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIAVHPNSNWLAAQSLDNQILIYS
TKERFQLNKKKRFAGHIVAGYACQVSFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLKCH
NGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccagtcctcgtacgcgcctggtgacgcatcctcgccggaggacgagtcg
ctctcctccccggacacctccccactccgcctcccctccaagtccgccgcccccgccgtc
gatgagacagcgctcgcgctatccgccgccgccacttccacctcccgtcctatcgacccc
tccctccacctcatccccttcaaccccaccgccgaccagctctgggcgcccgtcctcggt
cctcagcacccccacgcgcctatctcatccgcatctggtcaccgtaaccacaagctcggt
catgtcgaagacgcagcgctcctccccttcctcttcgacgagcagtataacactttccat
cgcttcggctacgcatctgacccctccggcctccacatcatcggcgacgcgcagccacag
gcgcccgacctcgacaccgtctacaacctccctccttctgagcacaagcgccgccgcatc
caatccagggaggaaaaccacgagcccctccccccagaggcccaaaaccctgcatccgac
gagtgggtcgtgcacaacaaaaagagtccctgggctggcaatcgggagggcccgcctgtg
gagctcacggacgagcagagacagtacgccgaggcacatgcggccaagaaggctgagaag
gaggcacgaggtgaagggaaggagaaaacagaggtggtggtcaagagcaccttccatggg
aaggaggagaaggactaccagggacgatcgtggatcactccacccaaggatgccaaggcg
accaacgagcgctgttatattcccaagaggtgtgtacacgagtgggttggacacaccaag
ggggtctcagcgatcagattttctcccaagtatggccatctattgctgtctgcaagtatg
gattgtaagattaaaatctgggacgtgcttgagtcgaagacatgtatgcggacgtacatg
gggcactccaaggcggtacgggatatatcgttctctaatgacggtagtaagttcttgagt
gctggctatgaccggaatattcagtattgggatactgaaactgggcaggtgatctcgacc
ttctctactggtaaggtaccttatgtcgtgaagctcaatcctgatgaagataagcagcat
attctccttgctgggatgagtgacaagaagatcgtgcagtgggatatgaagtcagggcag
atcacacaggaatatgatcagcacttgggggcggtgaacactattacctttgtagataat
aataggaggtttgtgacatctagcgatgacaagtctcttcgtgtgtgggagtttggcatc
cctgtagttattaagtatatcagtgagccgcacatgcactccatgccgtctattgcagta
cacccaaactctaactggctggcagcacagagcttggacaatcagatactgatatacagc
acgaaggaaaggtttcaacttaataagaagaaaaggtttgcaggccacattgtggcaggt
tatgcttgtcaggtgagcttctctcctgatgggaggtttgtgatgtcaggagacggtgaa
ggtagttgctggttctgggactggaaaagctgcaggagattcaagacattgaagtgccac
aatggagtttgcattggatgtgagtggcatccgttggagactagcaaggttgcaacgtgt
ggatgggatggtgtcataaaatactgggattaa
DBGET
integrated database retrieval system
