Triticum aestivum (bread wheat): 123086872
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Entry
123086872 CDS
T07757
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123086872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123086872
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123086872
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123086872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
ABC_tran
ATPase_2
Helicase_RecD
AAA_16
SLFN-g3_helicase
NPHP3_N
T2SSE
Dynamin_N
nSTAND3
Flavi_DEAD
SRP54
AAA_18
FtsK_SpoIIIE
Cas3-like_C_2
AAA_33
AAA_29
Motif
Other DBs
NCBI-GeneID:
123086872
NCBI-ProteinID:
XP_044364629
UniProt:
A0A3B6HVP8
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All DBs
Position
4A:complement(547502986..547516116)
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AA seq
705 aa
AA seq
DB search
MPSPSPSRLPVLPISEHEDEIVAAVEANPVIVVIGETGSGKSTQLSQILHRRGYTRRGAI
AVTQPRRVAAVSVSRRVAQELGVSIGEEVGYAIRFEDRTSEKTKIKYLTDGVLLRESLSN
PELKQYSVIILDEAHERSLNTDILLGLMKRLIKHRASDLKVLITSATLDGLKVSNFFSGC
PVLNIPGTIFPVEKFYSTDRPTNYIESSLRTAIDIHVKEAPGDVLIFMTGKDDIDKMVSK
LEERIQNLEEGSCMDALVLPLHGSLPPEQQVRVFSPAPPNCRRFIVATNVAETSLTVDGV
VFVVDCGYVKQRQYNPSTGMYSLDVVEISRVQADQRAGRAGRTRPGKCYRLYPSSIYQKE
FLEATIPEIQRTSLAGSVLYLKSLNLPDIDILKFDFLDPPSRESLEDALRQLYLIDAIDE
SGQITDVGRLMAELPLDPSLSRTLIEANELGCLSQALTVAAVLSAEITLRQTRNKDMEGK
RKRQELSDGSGWGDHVQLLQIFESWDQADYDPRWCSEHDLQVRGMKFSKDVRNQLSQIIQ
KIAKGPTDLQARRGRKSDPDYRKLRRALCVGYGNQLAERMIHHNGYHTVGYRTQLVQVHP
SSVLEGDEYGKLPVYVVYHELINTTRPFMRNVCGVEQTWVKPILKKLEKLNINKLSGGSS
ALIDYEPLEEKQPGSPTKAAAAKQSDVDSKIQAARERYLARKGKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgccgtcgccgtcgcggctgccggtgctgccaatctcggagcacgaggacgag
atcgtggccgccgtggaggcgaacccggtgatcgtggtcatcggcgagaccggctccggc
aagagcacccagctctcccagatcctccaccgtcgaggctacacccgccgcggtgctatt
gcggtcacccagccccgccgtgtcgcggccgtctccgtctccaggagggtggcacaagag
ctcggtgtctccattggggaagaagttggttatgctattcggtttgaagaccgaacttca
gaaaagactaagatcaagtacctcacagatggtgttcttctgcgggaaagcctttcaaat
cctgagttgaagcaatactcagtaattatcttggacgaagctcatgaacgtagcttgaac
actgatatccttttaggtttaatgaaaagattgatcaaacatcgagcttcagatttgaaa
gttctcatcacttcggcgactctcgatggtttgaaagtgtcaaatttcttctctggatgt
cctgtgttgaacatccctggaactatattccctgtggagaagttttacagcacagatcgt
ccaacaaattatattgaatcttctctcagaacagctatagatatacatgttaaggaagct
cctggggatgtattaatatttatgacaggaaaggatgacatcgacaagatggtgtcaaaa
ttggaggaaagaattcaaaatcttgaggaaggatcttgtatggatgctcttgtcctacca
ctccatggttctttgccacctgaacagcaggttcgggtattctctccagcacctccaaat
tgtcgacggttcattgttgcaacaaatgtagctgaaacttcgttaactgtagatggtgtt
gtgtttgttgttgattgtggttatgtaaagcaacgccagtataatccatcaactggaatg
tattcacttgatgtagttgagattagcagagtgcaagctgaccagcgagctggacgagct
ggaagaactcggcctggcaagtgttatagattatacccaagttccatctaccaaaaggag
tttctcgaggctacaattccagaaattcaacgaacctcccttgctggaagtgttctgtat
ctgaaatcattaaatcttcctgatatcgacattctaaagtttgatttcctcgacccacca
tcacgtgaatcattagaagatgctttgaggcagttatacctcattgatgcaattgatgaa
agtgggcaaataacagatgttggacgccttatggcagagctccctcttgacccttcgctt
tcaaggactttgattgaagctaatgaactgggatgtctgtctcaggcattaactgttgct
gcagtcttgtccgctgaaatcacactgcggcaaactagaaacaaggatatggaaggaaag
agaaaacggcaagagctctctgatggttctggctggggtgaccatgtacaattgcttcaa
atatttgaaagctgggatcaagcagactatgatccaagatggtgctcagaacatgattta
caggtacggggcatgaaattcagcaaagatgtgagaaaccaattaagtcagattattcaa
aaaattgctaaaggtccaacagatttgcaagcaaggagaggacggaagagtgaccctgac
tacagaaaattgaggagagcactttgtgtaggatatggcaaccagttagctgagaggatg
attcatcataatggttaccatacggttggatacaggacacaacttgtgcaggtgcatcca
tcttctgtactggaaggggatgaatacgggaaactgcctgtgtatgtcgtctaccacgaa
ctaataaatactacccgccctttcatgagaaatgtttgtggggtcgagcagacttgggtt
aaaccaatcttgaagaagcttgagaaactgaacataaacaaattaagcggcggttcaagt
gcgttgatagattacgaacctctagaggagaagcaaccaggctcgccgacaaaagctgca
gctgctaagcaatctgatgtggatagtaaaatccaggcggcccgagagcgctaccttgca
cgaaaaggcaagaagtga
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