Triticum aestivum (bread wheat): 123090547
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Entry
123090547 CDS
T07757
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123090547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123090547
03019 Messenger RNA biogenesis [BR:
taes03019
]
123090547
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123090547
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
123090547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
Pcf11_C
Rib_mS39_PPR
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
123090547
NCBI-ProteinID:
XP_044367796
LinkDB
All DBs
Position
4B:complement(9235301..9241156)
Genome browser
AA seq
989 aa
AA seq
DB search
MRASMEASAAAARRSAAPDPPGAAKKQRLLAPPRDPRSSSAAYGGGASNGSGAAAAAAAE
QQAQVDELVAQYRTALGELTFNSKPIITNLTIIAGENLHAARSIAALVCANILEVPSDQK
LPSLYLLDSIVKNIGKDYVKHFSSKLPEVFCKAYRQVDPPVHTSMRHLFGTWKGVFSPAS
LQMIEKELGFQSSANGSSGAAPSKADSPSQRPSHSIHVNPKYLEARQQLQQPNKGILGAG
AKTPIISDADDVIERGNRIGIDKGTGRRLDTLNSRPRAQKVTFSNPIHEKPERDARGPGI
AGAGQVRSKPKGQDGIVGAYYTGGVSSPEEIFDRRNHLYATKDARSSGSVRLDSALLPTP
VSNSDRIGRLSSSDKSWKNSEEEEYIWDDIPSQGADYGGASSARKGEPLADDGNIRSFHR
ANWAEPGDPLDPDFHKQDTIPRFGHPTSQDRRLAPYMDHAEYLHSKRDGDPRIDREMWPE
GQPFPESRGSSVWLSQEKLRPDIGRDPRISRFSNQSPSITSSVPVGLSGAYAGRSSLESA
KQKYWPPSSPPLQARESSPSSSEHDIYASRPFLPPQEEHNQRTHALSQNSVNSQGRPSLQ
ATLSQASQQSQKHPPVQSKPHPKPFHQPFPQENSSSLFRPSVHLPLSTGIEEQPEEVSLP
SGPAHAKSDQISASNLLAGLFKGGFIPNTSDHAVPHSHGLASLPSSSASENAPLKPHAPN
SLRPPLPPGPPPTQSAEKAAAPLSSLLSSLVAKGLISSPSTDSSAGARNPGKSSPSTSDV
SASAPPPPVVQPSVAKETPAPTKALLPKPPEVEMADLIGLEFKPVVLREHRTEVVNRLFD
DQSHQCRTCGLRFRLEDELSAHTACNGPEEARNAGIAPERWYPSKSRWIDRLPEPQSIFL
DSASDKDLGTAEEVCEFMVPADESQIICCLCGEQFDDMYSVDRSEWMYKDAVYYDRSKAE
GGSSQSKELAPIVHARCMPGISNDGMEVD
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcctcgatggaggcctccgcggccgcggcgcgcagatccgcggcgccggacccc
ccgggcgcggccaagaagcagcggctgctcgcgccgccgcgggaccccagatcctcctcc
gccgcgtacggcggcggcgcgtccaatgggagcggcgcggcggcggcggccgcggcggag
cagcaggcgcaggtggacgagctggtggcgcagtaccggacggcgctcggggagctcacc
ttcaactccaagcccatcatcaccaacctcaccatcatcgccggcgagaacctccacgcc
gcccgctccatcgccgccctcgtctgcgccaacatcctcgaggttccaagtgatcagaag
ctaccatctctttatctgcttgacagtatagtcaagaatattggaaaagattatgttaaa
catttttcttcaaaattacctgaggtgttttgcaaggcctatagacaggttgatcctcct
gttcatactagcatgagacaccttttcggaacatggaaaggagtgttttctccagcttca
ctgcaaatgattgagaaggagcttggttttcaatcatctgctaatggatcatcaggtgct
gcaccatcgaaggccgattcgccatcccagcgcccgtcccacagcatacatgtaaaccca
aaatatttggaagcaagacagcagctccaacaaccaaataaggggattctgggagccggt
gccaagacacctataatttctgatgctgatgatgttatcgaaaggggtaataggattggt
attgataaaggcacagggagacgcctggatactctgaactctaggcctcgtgctcagaag
gttacttttagcaaccccattcatgaaaagccagagagagatgcgaggggccctggaatt
gcgggagctggtcaagttcgctcaaagcccaaaggccaagatggaattgtgggggcatat
tacactggaggtgttagttcccctgaagaaatatttgacagacgcaaccatttgtatgca
accaaggatgctcgctcttctggctctgtacgtttggacagtgcacttctcccaactcct
gtcagtaattctgataggattggtagactgtcatcatctgataaaagctggaagaactct
gaggaagaagagtacatctgggacgacataccttctcaaggagcagattatggaggtgcc
agttctgcaagaaaaggagaacccttggctgatgacggcaatattagaagcttccatagg
gctaattgggcagagcctggagacccgttggaccctgacttccacaaacaagataccatc
ccaagatttggacatccaacaagccaagatagaagacttgcaccgtacatggatcatgca
gagtatcttcatagtaagcgtgatggggatccaagaattgatagggaaatgtggcctgaa
ggacaaccgttcccggaatctcgtggctcctctgtatggttatcccaggaaaaacttcga
ccagacattgggcgggatcccaggatatcaaggttttctaatcagtcaccaagcatcact
tcatctgtacctgttggattatcaggggcctacgctggacgatcaagccttgaaagtgca
aaacaaaaatattggccgccttcctcgcctcctctccaggcccgtgagagctccccaagt
tcctcggagcatgacatttatgcttccagaccatttctgccaccccaggaagagcataac
caaaggactcatgccttgtctcaaaattccgtgaattctcagggtcggcctagtctgcaa
gcaactctgtcacaggcttctcagcagtctcaaaagcaccctcctgtgcagtcaaagcca
catccgaagccatttcatcaaccctttccacaagaaaattcttcatcgctgtttagaccg
tctgtccatctgcctctgtctaccggaatagaagagcagcctgaagaggtgtccttgccc
agtggtcccgcacatgcaaagtcagatcagataagtgctagtaatttgttggctggtctt
tttaagggtggattcataccaaacacaagtgatcatgctgtcccacattcacatgggttg
gcatctcttccatcttcctcagccagcgaaaatgcccctttgaagcctcatgcaccgaac
tctctccgcccacctttgccgccaggtccgccaccaacacagagtgctgagaaagctgct
gcaccactgtcaagccttctcagttctctggttgcaaaggggctaatttcttcaccgtcc
accgattcgtctgctggtgcaaggaaccccggtaaatcaagtccgagcacatcagatgtc
agcgcttcagctccacctccgccagtcgtccagccttcagttgctaaggagacacctgcc
cctacaaaagctttgttgcccaaacctcctgaagtggagatggctgacctaattggcctt
gagttcaagccagtggtgcttcgcgagcaccgtacagaggtggtcaacagactctttgat
gaccaaagccatcaatgcagaacatgtggtttaagattcagacttgaagatgagctcagt
gcacacactgcctgcaatggaccagaggaggctagaaatgccggcatcgcacctgaaaga
tggtaccctagcaagagccgttggatcgacagattacctgaaccgcagagcatcttcctg
gactctgcatctgataaagacctgggaaccgcagaggaagtttgtgagtttatggtccct
gcagatgagagccagattatctgctgtctttgtggggagcagtttgatgacatgtattcc
gtcgataggagcgagtggatgtacaaggatgctgtgtattatgatcgctcaaaggccgaa
ggtggcagctcccagagtaaagagctggcacccattgtccatgcaagatgtatgccggga
atctcaaatgatggcatggaggtggattag
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integrated database retrieval system
