Triticum aestivum (bread wheat): 123090560
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Entry
123090560 CDS
T07757
Name
(RefSeq) general negative regulator of transcription subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123090560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123090560
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123090560
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123090560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Peptidase_M9_N
DUF5646
Motif
Other DBs
NCBI-GeneID:
123090560
NCBI-ProteinID:
XP_044367809
UniProt:
A0A3B6IMN6
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Position
4B:11092996..11100669
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AA seq
882 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPREKAKAETRDWLNSVVSDLENQIDNFEAELEGLSFKKGKQRPPRLVHLEKSITRHKA
HIKKLESILRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSDVEDLYSTLPMEKVEA
LEDMVSLAPSILIKGVAAVSTTAVLSTKSPTATSPTQATVSTISQGTSQDQAEETTTLES
NPESVPQTPPPKGGNLGPSVPVVPTAISTSAAAVSVSADTITSPGPVRPVIPATAPTIFA
PAAVRNAPESMPAVASTPANLSTAVKDDESMSFPPRRPSPAVTEIGLGRGIARGLTSQPL
AAPISVGPVPGNGSITAIPPINDLSKRNIMNTDERVNSGGLSQQLVSPLGSKVQPQPVLK
TNDAVSSDSSNTSESAVIGGRVFSPPVVPGAQWRPQAPAGFQNQSETGQFRGRPEVTDQR
EKYLQRLQQVQQQQGNLLNASHITGINQKQFPTQQPNSLLQQFNSQSSSISSQGGLGLGG
QGPGIPSAFSSQLEPHESQIPEQYAGQTKSDEQQGLADDASVESAATTGPNKHTNEDDTK
APYSNPPASVAEGTQLSRDSDLSPGQPMQAGMPSSGVGVIGRRSVSDFGAIGDNLSGASV
VSGHDHLYNLQMLEAAYHRLPQPKDSERAKTYIPRHPSVTPASYPQIQAPIVTNPAFWER
LGSDTLSTDMLFFAFYYQQNSYQQYLAAKELKKQSWRFHRKYNTWFQRHVEPQVTTDEYE
RGSYVYFDFHLADDGNGWCQRIKNDFTFEYNFLEDELSVQPN
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagtcggaagctgcagggcgagatcgaccgcgtgctcaagaaggtgcaggag
ggcgtcgacgtcttcgacagcatctggaacaaggtctacgacaccgagaatgccaaccag
aaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgctaccgcgac
cagatcaagacctggatccagtccagcgagatcaaggacaagaaggttagtgcctcttat
gagcaggctctcatggatgcccgcaagcagattgaacgcgagatggaacgatttaaggtc
tgtgagaaggaaactaaaaccaaggccttctcgaaagaagggttaggtcaacagcctaaa
actgatcctagagagaaggctaaagctgaaacaagagattggcttaacagtgtggttagt
gatttggaaaatcagattgataattttgaagcggagcttgaaggactttcatttaagaaa
ggaaaacaaagacctcctcgattggtacatttagagaaatctattacgcggcataaggct
catataaaaaaattggagtcaattctgagactcttggataatgatgagttgagtcctgag
caagtcaatgatgtgaaagatttcctagaagactatgttgaacgtaatcaggaagatttt
gatgaatttagtgatgttgaggatctctatagcacattgcctatggagaaggttgaagca
ctcgaagacatggtttcacttgctccttccattcttatcaagggtgttgctgctgtttcc
actactgcagttttgagtacgaagagtccgacagcaacttcacctactcaggctactgta
tcaacaatctcacaagggacatcacaagatcaagcagaggaaacaactacgctagaaagc
aatcctgaatcggtgccacaaacaccacctccgaagggtggaaatctgggaccatcagtg
ccagttgtgcccactgccattagtaccagtgctgcagctgtttccgtttcggcagatact
attacttccccaggcccagtacgaccagttattcctgccacagcacccacaatatttgct
cctgctgctgttcgaaatgctccagagagcatgcctgctgttgcttcaactcctgcaaac
ttatctactgccgtgaaggatgatgaaagcatgagctttcctccacgtagaccgtctccc
gcagttactgaaattggtcttggcaggggtattgcccgtggcttaactagtcagccttta
gctgctcccataagtgtaggcccagttccaggaaatgggtccattactgcaattcctcca
ataaatgacctgtccaaacgaaacataatgaataccgatgagagggttaacagtggcggt
ctttctcagcagttggtttcacctcttggtagtaaagttcaaccacagccggttctgaag
actaacgacgcagttagctctgattccagtaacacaagtgaaagtgcggttattggagga
agggtattttctcctccggttgttcctggggctcagtggaggcctcaagctcctgctggt
ttccaaaatcaaagtgaaactggtcaatttcgtggaagacctgaggtcaccgaccaaagg
gagaagtacttgcaaagattgcaacaagtacagcagcagcagggcaaccttcttaacgct
tctcatataacaggcatcaaccagaagcaatttccaacccagcagcccaattccctctta
caacagtttaattctcagagttcttctatctcttctcaagggggccttgggctagggggt
cagggaccaggtatcccttctgccttctcgtctcagctagaacctcatgaatcccaaatt
cccgagcaatacgctgggcaaacaaaaagtgatgagcaacaaggcttggccgatgatgct
agtgtggagtctgctgcaacaactggacctaataagcacaccaatgaagatgacactaag
gctccttattcgaatcctccagcatccgtagcagaaggcacccagctatctagagactct
gatctatcacccgggcagcctatgcaagctggcatgccatcatctggtgttggtgttatc
ggccggaggagtgtatctgattttggagcaattggagacaatctcagtggagcttcggta
gtttcgggtcacgatcacctttataatttgcaaatgctcgaagctgcataccacaggctt
ccccagcccaaggactctgagcgtgcgaaaacttatattccgaggcacccttcagtgacc
cctgctagttacccacagattcaggcaccgattgtgacaaatcctgctttttgggaaagg
ctcggtagtgatacattgtctacagatatgttattctttgcattctactatcagcagaac
tcgtaccaacagtatttggccgccaaagaactaaaaaagcagtcatggagatttcacagg
aagtacaatacttggttccaacggcatgtggagccacaggtcacgaccgatgagtatgag
cggggatcgtacgtgtactttgattttcatctcgcagatgacggcaatgggtggtgccaa
aggatcaagaacgacttcacatttgaatacaacttccttgaggatgaactgtcagtacaa
ccaaactag
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