KEGG   Triticum aestivum (bread wheat): 123090874
Entry
123090874         CDS       T07757                                 
Name
(RefSeq) vacuolar sorting protein 39-like
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:taes00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    123090874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:taes04131]
    123090874
Membrane trafficking [BR:taes04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    123090874
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C Clathrin TPR_Vps41 AlaDh_PNT_N DUF4837
Other DBs
NCBI-GeneID: 123090874
NCBI-ProteinID: XP_044368163
UniProt: A0A3B6ILG5
LinkDB
Position
4B:complement(40597375..40607678)
AA seq 984 aa
MVHSAYDAVELVSGVPGRIEAVASHAGKLLVAASDCSLRIYSPPAPADGEIRRDGPYALE
RQEQRLWRRAPSAMEASASRGLLLSLSEWVALHRLPGLETVAVVSKTKGANVFAWDDRRG
LLAAGRQKRLTVFRLDSGREFVEVKEFSVPDIVKSMAWCGDNICLGIRRDYMIINSVTGA
LTEVFSSGRIAPPLVVPLPTGELLLGKDNIGVFVDQNGKLIQDGRIIWSDTPASVVIHKP
YAVARLPRHVEIRSLRAPSALVQTVVLRDVQKLVQTDNYILASLSNSVYGLLPVPIGAQI
VQLTASGEFEDALALCKLLPPEDSNLRAAKESSIHMRYGHFLFDNGSYEEATEQFSDAHV
DITYVLSLYPYLVLPQTHIIGEHDKLQDLQELARESSDATDEMEAYSLQLHDSDDKSPLE
NKKMSHNALIALVKYLQKKRNGIIDRATSEVTEEVVSGAVHHSLNLSEPYKAKKPNKKRP
QTHRSSVAREMANVLDTSLLQALILTRQSPGAIELLKGLNYCDLKICEEFLKEKSDYMVL
LELYRSNDMHREALQLLNRLVEESKSAMANADFSKKFNPQMIIEYLRPLCRSDPMLVLES
SLYVLERNPSDTIELFLSENVPADLVNSYLKQHAPNLQSTYLELMLSMSETGINPNLQNE
LVQLYLSEVLDWYKILKDEGNWTDKTYSPTRNKLISTLESNSGYNTDTLLKRLPQDALFE
ERAIMYGKMNQHLRALSLFVHKLHMPERAVGYCDRVYEEGAQQPSKSNIYFNLLQIYLNP
KKAEKEIEQKIIPMASQYPGIQRVNSTNKLRGGRMGRKVVEIEGAEDTRFSPSGPDSGRS
DGDGDDVSDGGPIMLNEALELLSQRWDRINGAQALRLLPRDTKLQDLVSFLEPLLRNSSE
HRRNYMVIKNLILRANLQIKEDLYKRRQAVVKIDGDSMCSLCHKRIANSAFAIYPNGQTL
VHFVCFRESQQIKAVRGANSAKRR
NT seq 2955 nt   +upstreamnt  +downstreamnt
atggtgcacagcgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatcgag
gccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgcatc
tactccccgccggcccccgccgacggcgagatccggagggacgggccctacgcgctcgag
cgccaggagcagcgcctgtggcgccgcgcgccctccgccatggaggccagcgccagccgc
ggcctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctcgagacc
gtcgccgtcgtctccaagaccaagggcgccaacgtcttcgcttgggacgaccgccggggc
ctgctcgccgccggccgccagaagcgcctgaccgtcttccgcctcgacagtgggcgagaa
tttgtcgaggtgaaggaatttagtgtccctgatattgtgaaatcaatggcctggtgtggt
gacaacatatgccttgggatcaggagggactatatgatcataaatagtgtgactggggca
ttaactgaagtgttttcttctgggaggattgctcctcctttagttgtgccccttcctacc
ggggagctcctccttggaaaggacaacattggtgtatttgttgatcaaaacgggaaactt
attcaagacggtcggataatttggtcggacactcctgcctctgttgttatacataagcca
tatgctgtggcacgtctgccacgacatgttgagatacggtctcttagagctcccagcgca
ttggttcagacagttgtcctccgtgatgttcaaaagcttgttcaaactgacaactatata
cttgcttcgctgtccaactcagtctatggtttgctgcctgttcctattggtgcccagata
gtgcaattgaccgcctctggagaatttgaggacgcgctggcattgtgtaagttacttcca
cctgaggattcaaacctacgagctgcaaaagaaagctcaatacacatgagatatgggcac
ttcttatttgataatgggagctatgaggaagcaacagaacagttttcggatgcacatgtg
gatattacttatgtgttatctctatacccataccttgttctgcctcaaacacacattata
ggtgaacatgacaagcttcaagacctgcaagaattagcaagagaatcttctgatgcgaca
gatgaaatggaagcatactctttgcaacttcatgattctgatgataaatctccattggag
aacaagaaaatgagtcataatgctctaatagcccttgtgaagtacttgcagaagaaaaga
aatggtataattgatagagcgacatctgaagtaactgaggaggtcgtctctggagctgtg
caccatagcttaaacttatctgagccatataaggcaaagaagccaaataagaaacgaccc
caaacacatagaagctctgttgcaagagaaatggcgaatgtactggacacatctcttctt
caagctcttattcttacaagacagtcaccaggagctatagagttattgaaaggactcaat
tattgtgatttgaagatatgtgaggagtttctgaaggaaaagagcgattatatggtatta
cttgagctctacagaagcaatgacatgcaccgtgaagctctccagttactcaatcggttg
gttgaagaatcaaagtctgcgatggcaaatgctgattttagtaaaaagtttaacccacaa
atgatcattgagtatctcaggcccctttgtagatctgacccaatgctggttttggagtct
tctttgtatgttcttgaacgcaacccgtcagacactattgagctctttttgtctgaaaat
gttccagcagatttggtaaattcatatctgaaacagcatgctccaaatttgcagtcaact
tacttagagctaatgctttcaatgagtgaaaccgggatcaaccctaatctacaaaatgag
ctggtgcaactttacctttctgaagttcttgactggtacaagattctgaaggatgaagga
aattggactgataaaacatattccccaacgcggaacaagttgatatctacattagagagt
aattcaggttacaatacggacacacttcttaaacgccttccacaggatgctctttttgaa
gagcgtgctatcatgtacgggaaaatgaatcaacacctccgtgcattatctctctttgtt
cataagctccatatgccagagcgtgccgttggatactgtgaccgtgtttatgaggaagga
gcgcagcagccttccaagtccaatatttattttaatcttctgcaaatttatctaaacccg
aaaaaagctgaaaaagagatcgagcagaaaattattccaatggcatcacagtaccctgga
attcagagggttaactctactaataagctcagaggagggcgtatgggtagaaaggttgtt
gagattgaaggggctgaagacacacgctttagccctagtggaccagatagtggccgaagt
gatggtgatggagatgatgttagcgacggaggccctataatgttgaacgaagcacttgaa
ttgttaagccaacggtgggacagaataaatggtgctcaggctcttcggttgttaccaaga
gacacaaaactgcaggatctggtgtcatttctcgaaccactattgcggaactctagtgaa
catcggcgcaattatatggttatcaaaaacttgattctccgggcaaacttgcagataaag
gaggacctgtacaaacgacgccaagctgttgtgaagattgatggagatagcatgtgttct
ctttgtcataagcgcattgcaaacagtgctttcgcaatctatccaaatggacagacattg
gtgcattttgtgtgctttagagaatcacaacagatcaaggctgttagaggcgcaaactct
gcgaaacgtagatga

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