Triticum aestivum (bread wheat): 123090874
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Entry
123090874 CDS
T07757
Name
(RefSeq) vacuolar sorting protein 39-like
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123090874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
taes04131
]
123090874
Membrane trafficking [BR:
taes04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123090874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
AlaDh_PNT_N
DUF4837
Motif
Other DBs
NCBI-GeneID:
123090874
NCBI-ProteinID:
XP_044368163
UniProt:
A0A3B6ILG5
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Position
4B:complement(40597375..40607678)
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AA seq
984 aa
AA seq
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MVHSAYDAVELVSGVPGRIEAVASHAGKLLVAASDCSLRIYSPPAPADGEIRRDGPYALE
RQEQRLWRRAPSAMEASASRGLLLSLSEWVALHRLPGLETVAVVSKTKGANVFAWDDRRG
LLAAGRQKRLTVFRLDSGREFVEVKEFSVPDIVKSMAWCGDNICLGIRRDYMIINSVTGA
LTEVFSSGRIAPPLVVPLPTGELLLGKDNIGVFVDQNGKLIQDGRIIWSDTPASVVIHKP
YAVARLPRHVEIRSLRAPSALVQTVVLRDVQKLVQTDNYILASLSNSVYGLLPVPIGAQI
VQLTASGEFEDALALCKLLPPEDSNLRAAKESSIHMRYGHFLFDNGSYEEATEQFSDAHV
DITYVLSLYPYLVLPQTHIIGEHDKLQDLQELARESSDATDEMEAYSLQLHDSDDKSPLE
NKKMSHNALIALVKYLQKKRNGIIDRATSEVTEEVVSGAVHHSLNLSEPYKAKKPNKKRP
QTHRSSVAREMANVLDTSLLQALILTRQSPGAIELLKGLNYCDLKICEEFLKEKSDYMVL
LELYRSNDMHREALQLLNRLVEESKSAMANADFSKKFNPQMIIEYLRPLCRSDPMLVLES
SLYVLERNPSDTIELFLSENVPADLVNSYLKQHAPNLQSTYLELMLSMSETGINPNLQNE
LVQLYLSEVLDWYKILKDEGNWTDKTYSPTRNKLISTLESNSGYNTDTLLKRLPQDALFE
ERAIMYGKMNQHLRALSLFVHKLHMPERAVGYCDRVYEEGAQQPSKSNIYFNLLQIYLNP
KKAEKEIEQKIIPMASQYPGIQRVNSTNKLRGGRMGRKVVEIEGAEDTRFSPSGPDSGRS
DGDGDDVSDGGPIMLNEALELLSQRWDRINGAQALRLLPRDTKLQDLVSFLEPLLRNSSE
HRRNYMVIKNLILRANLQIKEDLYKRRQAVVKIDGDSMCSLCHKRIANSAFAIYPNGQTL
VHFVCFRESQQIKAVRGANSAKRR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatcgag
gccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgcatc
tactccccgccggcccccgccgacggcgagatccggagggacgggccctacgcgctcgag
cgccaggagcagcgcctgtggcgccgcgcgccctccgccatggaggccagcgccagccgc
ggcctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctcgagacc
gtcgccgtcgtctccaagaccaagggcgccaacgtcttcgcttgggacgaccgccggggc
ctgctcgccgccggccgccagaagcgcctgaccgtcttccgcctcgacagtgggcgagaa
tttgtcgaggtgaaggaatttagtgtccctgatattgtgaaatcaatggcctggtgtggt
gacaacatatgccttgggatcaggagggactatatgatcataaatagtgtgactggggca
ttaactgaagtgttttcttctgggaggattgctcctcctttagttgtgccccttcctacc
ggggagctcctccttggaaaggacaacattggtgtatttgttgatcaaaacgggaaactt
attcaagacggtcggataatttggtcggacactcctgcctctgttgttatacataagcca
tatgctgtggcacgtctgccacgacatgttgagatacggtctcttagagctcccagcgca
ttggttcagacagttgtcctccgtgatgttcaaaagcttgttcaaactgacaactatata
cttgcttcgctgtccaactcagtctatggtttgctgcctgttcctattggtgcccagata
gtgcaattgaccgcctctggagaatttgaggacgcgctggcattgtgtaagttacttcca
cctgaggattcaaacctacgagctgcaaaagaaagctcaatacacatgagatatgggcac
ttcttatttgataatgggagctatgaggaagcaacagaacagttttcggatgcacatgtg
gatattacttatgtgttatctctatacccataccttgttctgcctcaaacacacattata
ggtgaacatgacaagcttcaagacctgcaagaattagcaagagaatcttctgatgcgaca
gatgaaatggaagcatactctttgcaacttcatgattctgatgataaatctccattggag
aacaagaaaatgagtcataatgctctaatagcccttgtgaagtacttgcagaagaaaaga
aatggtataattgatagagcgacatctgaagtaactgaggaggtcgtctctggagctgtg
caccatagcttaaacttatctgagccatataaggcaaagaagccaaataagaaacgaccc
caaacacatagaagctctgttgcaagagaaatggcgaatgtactggacacatctcttctt
caagctcttattcttacaagacagtcaccaggagctatagagttattgaaaggactcaat
tattgtgatttgaagatatgtgaggagtttctgaaggaaaagagcgattatatggtatta
cttgagctctacagaagcaatgacatgcaccgtgaagctctccagttactcaatcggttg
gttgaagaatcaaagtctgcgatggcaaatgctgattttagtaaaaagtttaacccacaa
atgatcattgagtatctcaggcccctttgtagatctgacccaatgctggttttggagtct
tctttgtatgttcttgaacgcaacccgtcagacactattgagctctttttgtctgaaaat
gttccagcagatttggtaaattcatatctgaaacagcatgctccaaatttgcagtcaact
tacttagagctaatgctttcaatgagtgaaaccgggatcaaccctaatctacaaaatgag
ctggtgcaactttacctttctgaagttcttgactggtacaagattctgaaggatgaagga
aattggactgataaaacatattccccaacgcggaacaagttgatatctacattagagagt
aattcaggttacaatacggacacacttcttaaacgccttccacaggatgctctttttgaa
gagcgtgctatcatgtacgggaaaatgaatcaacacctccgtgcattatctctctttgtt
cataagctccatatgccagagcgtgccgttggatactgtgaccgtgtttatgaggaagga
gcgcagcagccttccaagtccaatatttattttaatcttctgcaaatttatctaaacccg
aaaaaagctgaaaaagagatcgagcagaaaattattccaatggcatcacagtaccctgga
attcagagggttaactctactaataagctcagaggagggcgtatgggtagaaaggttgtt
gagattgaaggggctgaagacacacgctttagccctagtggaccagatagtggccgaagt
gatggtgatggagatgatgttagcgacggaggccctataatgttgaacgaagcacttgaa
ttgttaagccaacggtgggacagaataaatggtgctcaggctcttcggttgttaccaaga
gacacaaaactgcaggatctggtgtcatttctcgaaccactattgcggaactctagtgaa
catcggcgcaattatatggttatcaaaaacttgattctccgggcaaacttgcagataaag
gaggacctgtacaaacgacgccaagctgttgtgaagattgatggagatagcatgtgttct
ctttgtcataagcgcattgcaaacagtgctttcgcaatctatccaaatggacagacattg
gtgcattttgtgtgctttagagaatcacaacagatcaaggctgttagaggcgcaaactct
gcgaaacgtagatga
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