Triticum aestivum (bread wheat): 123091106
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Entry
123091106 CDS
T07757
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123091106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123091106
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123091106
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123091106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
ATPase_2
ABC_tran
Helicase_RecD
AAA_16
SLFN-g3_helicase
NPHP3_N
T2SSE
Dynamin_N
nSTAND3
Flavi_DEAD
SRP54
AAA_18
Cas3-like_C_2
AAA_33
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
123091106
NCBI-ProteinID:
XP_044368441
UniProt:
A0A3B6IKY5
LinkDB
All DBs
Position
4B:74651036..74663902
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AA seq
705 aa
AA seq
DB search
MPSPSPSGPPVLPISEHEDEIVAAVEANPVIVVIGETGSGKSTQLSQILHRRGYTRRGAI
AVTQPRRVAAVSVSRRVAQELGVSIGEEVGYAIRFEDRTSEKTKIKYLTDGVLLRESLSN
PELKQYSVIILDEAHERSLNTDILLGLMKRLIKHRASDLKVLITSATLDGLKVSNFFSGC
PVLNIPGTIFPVEKFYSTDRPTNYIESSLRTAIDIHVKEAPGDVLIFMTGKDDIDKMVSK
LEERIQNLEEGSCMDALVLPLHGSLPPEQQVRVFSPAPPNCRRFIVATNVAETSLTVDGV
VFVVDCGYVKQRQYNPSTGMYSLDVVEISRVQADQRAGRAGRTRPGKCYRLYPSSIYQKE
FLEATVPEIQRTSLAGSVLYLKSLNLPDIDILKFDFLDPPSRESLEDALRQLYLIDAIDE
SGQITDVGRLMAELPLDPSLSRTLIEANELGCLSQALTVAAVLSAEITLRQTRSKDMEGK
RKRQELPDGSGWGDHVQLLQIFESWDQADYDPRWCSDHDLQVRGMKFSKDVRNQLSQIIQ
KIAKGPTDLQARRGRKSDPEYRKLRRALCVGYGNQLAERMIHHNGYHTVGYRTQLVQVHP
SSVLEGDEYGKLPVYVVYHELINTTRPFMRNVCGVEQTWVKPILKKLEKLNINKLSGGSS
ALIDSEPLEEKQPGSPTKAAAAKQSDVDSKIQAARERYLARKGKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgccgtcgccgtcggggccgccggtgctgccaatctcggagcacgaggacgag
atcgtggccgccgtggaggcgaacccggtgatcgtggtcatcggcgagaccggctccggc
aagagcacccagctctcccagatcctccaccgtcgaggctacacccgccgcggtgctatt
gcggtcacccagccccgccgtgtcgcggccgtctccgtctccaggagggtggcacaagag
ctcggtgtctcaattggggaagaagttggttatgctattcggtttgaagaccgaacttca
gaaaagactaagatcaagtacctcacagatggtgttcttctgcgtgaaagcctttcaaat
cctgagttgaagcaatactcagtaattatcttggacgaagctcatgaacgtagcttgaac
actgatatccttttaggtttaatgaaaagattgatcaaacatcgagcttcagatttgaaa
gttctcatcacttcggcgactcttgatggtttgaaagtgtcaaatttcttctcaggatgt
cctgtgttgaacatccctggaactatattccctgtggagaagttttacagcacagaccgt
ccaacaaattatatcgaatcttctctcagaacagctatagatatccatgttaaggaagct
cctggggatgtattaatatttatgacaggaaaggatgacatcgacaagatggtgtcaaag
ttagaggaaagaattcaaaatctcgaggaaggttcttgtatggatgcccttgtcctccca
ctccatggttctttgccacctgaacagcaggtacgggtgttctctccagcacctccaaat
tgtcgacggttcattgttgcaacaaatgtagctgaaacttcgttgactgtggatggtgtt
gtgtttgtggttgattgtggttatgtaaagcaacgccagtataatccgtcaactggaatg
tattcacttgatgtagttgagattagcagagtgcaagctgaccagcgagctggacgagct
ggaagaactcggcctggcaagtgttatagattatacccaagttccatctaccaaaaggag
tttctcgaggctacagttccagaaattcaacgaacctcccttgctggaagtgttctgtat
ctgaaatctttaaaccttcctgatatcgacattctaaagtttgatttcctcgacccacca
tcacgtgaatcattagaagatgcgttgaggcagttatacctcattgatgcaattgatgaa
agtgggcaaataacagatgttggacgccttatggcagagctccctcttgacccttcgctt
tcaaggactttgattgaagctaatgaactgggatgtctgtctcaggcattaactgttgct
gcagtcttgtctgctgaaatcacactgcggcaaactagaagcaaggacatggaaggaaag
agaaaacggcaagagctacctgatggttctggctggggtgaccatgtacaattgcttcaa
atatttgaaagctgggatcaagcagactatgatccaagatggtgctcagatcatgattta
caggtacggggcatgaaattcagcaaagatgtgagaaatcaattaagtcaaattattcaa
aaaattgctaaaggtccaacagatttgcaagcaaggagaggacggaagagtgaccctgag
tacagaaaattgagaagagcactttgcgtaggatatggcaaccagttagctgagaggatg
attcatcataatggttaccatacggttgggtacaggacacaacttgtgcaggtgcatcca
tcttctgtacttgaaggtgatgaatacgggaaactgcctgtgtatgtcgtctaccacgaa
ctaataaatactacccgccctttcatgagaaatgtttgtggggtcgagcagacttgggtt
aaaccaatcttgaagaagcttgagaaactgaacataaacaaattaagcggcggttcaagt
gcgttgatagattccgaacctctagaggagaagcaaccaggctcgccaacaaaagctgca
gctgctaagcaatctgacgtggacagtaaaatccaggcagcacgagagcgctaccttgcg
cgaaaaggcaagaagtga
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