Triticum aestivum (bread wheat): 123091413
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Entry
123091413 CDS
T07757
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 homolog
KO
K28108
shortage in chiasmata 1
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123091413
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123091413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
YycE-like_N
Motif
Other DBs
NCBI-GeneID:
123091413
NCBI-ProteinID:
XP_044368849
LinkDB
All DBs
Position
4B:125240443..125249059
Genome browser
AA seq
1740 aa
AA seq
DB search
MRTRFLAADYFSPPSAASCSDQALTLASLRFPPLPVPSLPPDPHFPFPLPFPAAADLPAV
SIPGDDLDSLPISSALSEFLAAVIPQALPAPAIPAADEGLDDFLYDRGGYRKGFSLRESV
AFKIPDGLDEISREKDGKGDGSRSDRLGTSTDTKRWELLKEHIFEVVEVDLPQILEGHVA
SFGGDESGDGVILLFGVPDAKIHLEFIDIDTEMTLSYPTELADSIYQVEKIPVKHNDEEH
LSARNINLLEIAALDCGVTIPLLEVHRHSWELNGCPTKAEMSNIFHNLVEHLGEAQVQHP
ALNSTEFSRSTDMDMLAFVSKDVPCADYQADKPITVRAAVEMDLVRINDNLLLERNSALY
PLKPDGTFSDLPCSVLLEEAQIIDFPSEDLFKMLVQSDAAELNTSDEIFKDDFNPARRFY
ESVVSSELVLVDDTFRSLPTPILSDDDMTLRSMVPSMGEVLCSLKTHSLSAADRIYLDWH
LLLEVPCNREISSTYASMVEEVKSCQLNSEMQVNCQQTSALGFDFLEYFWTSAKHQDEDK
QNNIYVPTPLPHDPPPVVETAQKYRQESDTGGHGHMEKPSSGKAASLFESMSQSSDINFY
LNVRSGTKRGTNDENISTLDIPTLNEQATSFPSRPKVDKLIEIHPVSLSDSIRALIKHIH
RSYTTALQESAYLRHTFSDGHLSISKQKLLGLITGDGSNGFDNHCKHEDKMELIVLYGLK
QAAYYLCFFGLHAGHLYISNLIGSFENIPERLRNIHSFIGEALSKAEKHQIDSHPSLHDI
EMILRSNTHTSQQILIVADTAFWLPLGQKLTSIKMTFVELGKDPAAAYLDPVDKPNPTTW
VLRGLPKSDCILLDNKNIPASFPFSEFGIVLEYGGPDKLSTLLSLAPNLDSFPQLHFLYV
KVDVEDPSVAVVEDNPTDQELRATLDTVLHALQKDLQEKMNKMRIVDSLNFIPATNQLQV
RQENLCKYSTADSTKKLPADDQLLKQENLEKEFVDAHNFVPTAEQRHREEMLSKRTILHS
QHFVPAVEKSSSTSSVSANVIKAPQDNLSGTDLPSGVKVGRLTPGRLSTPAIVVNTGSHG
KNMLFSRRSSYQQILSLEKGGMQVVERDVDLPVDLILSTAACLVWFETKIFGSNELTASA
ETSSITNFVEIIATNILMSISFCFCGCIMVFEGEPHSLSAVMESSDSLYAAAASLMMNVQ
IFFSCTPKLTDEIVLSCIRNVNMLNKAPSPDIPESESLAESFLTKFPSINPLSAYSMLSC
GSSLVEFLSWSHERRIQAVEKYLLSPQSISLFNALCKFGELGESRSVMTEGSSVDSDICS
ALLQSPSKRKRCASQVFAVPTSDPLHPDPLNQLPGDYVEHNNVFPQPKLRRFSDAEDATP
QLPEVFMFDQSLSRGGEGVSCLPRKHDIEAIIGNQIMGDHISNGFTADTREYNRRRVNNM
VDTYDFSWQPESGGKEPMESSFPASGPSFSKAYSHPVFPSALEINDDTGYWDISGGAHDT
WKGHVHGGIASTSCRNDVGSRYHEPTEEIMQKGHVHGDIASTSCRNDVGSRYHEPREEIM
HDPGSSLAFLKQHSGFHATPHGSSWEIDYLRQMNEKRRAREERSRCNTSAMMSNSRMRDG
AAKIINPPLIGSFRYRGDGDAPLRNRSPPVGTRHYEKAREGTKAHTHRARKDFKMQPSVS
HENRIEPSIYPSWTPIDKRARQKLSFATYGKEKQSKLVWRDPNSSGAECGFRKRYREEGT
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcgcttcctcgctgccgactacttctccccgccgtcggcggcctcctgttcg
gatcaagccctaaccctagcgtccttgcgcttccctcctctccccgtcccctcgcttccg
cccgatccgcatttcccgttccccctccctttccccgccgcggccgacctccccgcagtc
agcatcccgggcgacgatctcgactctctccccatatcctccgcgctatctgagttcctc
gcggccgttattccgcaggcccttcccgcaccggctatccccgccgccgacgagggattg
gatgatttcctctacgacaggggcgggtatcgcaagggttttagcttgagggagtctgtt
gcattcaaaatccctgatggattggacgagattagccgcgagaaggatgggaagggagac
ggatccaggtcagatagattggggacctccactgacacgaagagatgggaactgctgaag
gagcacatatttgaggttgtagaggtcgatctccctcagattttggaaggacacgttgca
tcctttggtggtgacgagtctggtgatggtgtcatcttattgtttggtgttccagatgcg
aaaatccacttggagttcattgatattgacactgagatgacattaagctatccaaccgaa
cttgcggattcaatttatcaagtagagaaaatccctgtgaagcataatgatgaggaacat
ttgtctgcaaggaatattaaccttttagagattgcagcattagattgtggtgtaacaata
ccactactggaggttcataggcattcttgggagcttaatgggtgtcccactaaggcagag
atgtctaatatttttcataaccttgttgaacatttgggtgaagcacaagttcagcatcca
gcgttgaactcaactgagttctcaagatcaactgatatggacatgttggcctttgtttcc
aaagatgtcccatgtgcagactatcaagcagataaaccaataacggttagggctgcagta
gaaatggatcttgtgaggatcaatgataatcttctacttgagagaaactcagcattatac
cctctcaagcctgatggcaccttttcagatttgccttgctcagttcttttagaagaagca
cagatcattgatttcccttcagaggatctcttcaaaatgcttgttcagtcagatgcagct
gagctgaatacatctgatgaaatattcaaagacgacttcaatccagcaaggcgtttctat
gaatcagtagttagctctgagttggtgctggttgatgatacattcagatcactacctaca
cctattttatctgatgatgatatgacactgaggtctatggtcccctccatgggagaagta
ctttgctccctgaaaactcattcactctctgcagccgacagaatttatttggactggcat
cttttattggaagttccatgcaaccgggagatatcctctacctatgcaagcatggttgag
gaggtaaaaagttgccagttaaattctgagatgcaagtcaattgtcagcagacatcggca
cttggttttgattttcttgagtatttttggacaagtgcaaaacaccaagatgaggacaaa
cagaacaatatttatgtgcctacccctctacctcatgatccacctcctgtagtggaaaca
gctcaaaaatacagacaagaaagtgatactggaggccacggccacatggaaaagccaagt
tcaggaaaggcagcttccttattcgagtcaatgtcacaatccagtgacataaatttctac
ttgaatgtcagaagcggcaccaagagaggaactaatgatgaaaatatttctactttagat
atccctactttaaatgaacaagcaacttcttttccaagcaggcctaaagttgacaagctc
atagaaattcatcctgtcagcctctcagattctatccgagcccttatcaaacacatccat
agaagctatacaactgctttgcaagaaagtgcatatttgaggcatactttctcggatggg
catttaagcatttcgaagcagaagcttcttggactgataactggagatggttcaaatggc
tttgataatcactgtaaacatgaagataagatggaactcattgtactctatggattaaaa
caggctgcatattatctatgtttctttggtttgcatgctggccatctgtacataagcaac
ctgattggaagctttgaaaatattcctgagaggttaagaaatattcatagtttcattggt
gaagcactgtcgaaagctgagaagcatcagattgactctcacccatcattgcatgacatt
gaaatgatcctgagatctaatacacacaccagccaacagatccttatagttgctgataca
gctttctggctgccattgggtcaaaaattaacttcgattaagatgacatttgttgagcta
ggaaaagaccctgctgcagcttatttagatccggtggacaagccaaaccctacaacttgg
gtgctcagaggattgccgaaatcagactgcattctgctagataataagaacattccagct
tcattccctttcagtgagtttggcatcgtactggaatacggaggtccagataaattatct
accttgttgtctctggctcctaatttagatagttttccacaactgcatttcctctatgtc
aaagtggatgttgaagatccttcggttgcagttgttgaggacaaccctactgaccaggag
ttgagagccacactggatacggttttgcatgcacttcagaaagatctgcaagagaagatg
aacaagatgcgtattgttgattcattgaactttataccagcaactaatcagttgcaagta
cggcaggaaaatctgtgcaaatatagcactgctgattcaacaaaaaaattgcctgcagat
gatcaactgctcaaacaagaaaatttggagaaagagtttgtcgatgctcataattttgtt
cctacagctgaacagcggcacagagaggaaatgttgagcaaaagaactatcctccattca
caacattttgtgcctgcagttgagaagagcagctctacctcttctgtatctgcaaatgtg
ataaaggccccacaagacaatctatctggtactgacttgccttccggtgtaaaagttggc
cgcctcactccaggaagattatccaccccggcgattgttgtaaatactggaagtcatgga
aagaatatgcttttctctcggagatcatcttatcagcagatcctatctttggagaaagga
ggaatgcaggttgtggaacgagacgttgatcttcctgtggacctaatactcagtactgca
gcttgcctagtatggtttgagacaaaaatctttgggagcaatgaattaacagcatcggca
gagacatctagtataacaaattttgtggagatcattgcgaccaacattctgatgtcaatt
agcttctgtttctgtggttgtataatggtctttgaaggtgaacctcactctctttctgct
gtaatggagtcatctgattctctatatgctgcagctgctagtctgatgatgaacgtgcag
atattcttctcatgcacacccaagttaacagatgagatagttctcagttgcattaggaat
gtgaacatgttgaataaagctccttctccagatatacctgaatcagaaagcttggctgaa
tcatttctcacaaaattcccttcaatcaatcccttgtctgcatacagtatgctttcttgt
ggaagcagccttgtggagttcctcagttggtcacatgagcgtcgtatacaggctgttgag
aagtatctgttgtccccgcagagcatttctctgttcaatgctttgtgcaaattcggtgag
ctaggtgaatctaggtctgtgatgactgaaggctcttctgtagattcagacatctgtagt
gcattgttgcagtctccaagtaaaaggaaaaggtgcgcctctcaagtttttgcagtacca
actagtgatcccctccatccggatcctctaaaccaattgcctggtgattatgtagaacat
aacaatgtattcccacagcctaagttgaggaggttctccgacgcggaggatgcaacgcct
cagctcccagaggtctttatgttcgatcaaagtttgagtaggggaggtgaaggggtctct
tgtctgccaagaaagcacgatattgaggcaataattggcaatcagatcatgggtgatcac
atcagcaatggatttactgcagatacgagggaatataaccgaagaagggttaacaatatg
gtggacacatacgacttctcttggcaaccggaatcagggggtaaagaacctatggaaagc
tcttttcccgcaagcggaccatcattcagcaaagcttacagtcatccagtatttccatct
gcattagagatcaacgatgatactggttactgggacatttcaggaggtgcacatgacact
tggaagggtcatgtacatgggggtattgcctcaacctcttgcagaaatgatgtgggcagc
agatatcatgagccaacagaggaaataatgcagaagggtcatgtacatggggatattgcc
tcaacctcttgcagaaatgatgtgggcagcagatatcatgagccaagagaggaaataatg
catgatccaggaagttcacttgcttttctgaaacagcattccggctttcatgcaactcca
catggctcaagctgggaaattgattatctcaggcaaatgaacgaaaaaagaagagcacgt
gaggagagatcaagatgtaatacatcagcaatgatgtcaaactcaaggatgagggatggg
gccgctaagatcataaatcctccacttattggatccttcagataccgaggagatggagac
gctcctttgaggaaccggagcccacctgttgggactcggcattatgagaaagccagagaa
ggaactaaagcacatacccatagagcaagaaaagatttcaagatgcaaccaagtgtaagt
cacgaaaacaggatagagccgtccatatatccatcgtggactcccattgacaagagagcc
agacagaaactttcatttgcaacatacgggaaggagaagcaaagcaagttggtctggaga
gacccaaatagctctggtgctgagtgtggcttccggaaaagataccgggaagaaggtacg
tag
DBGET
integrated database retrieval system
