Triticum aestivum (bread wheat): 123091594
Help
Entry
123091594 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123091594
03041 Spliceosome [BR:
taes03041
]
123091594
03036 Chromosome and associated proteins [BR:
taes03036
]
123091594
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123091594
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123091594
mRNA cycle factors
Common to processing body (P body) and stress granule
123091594
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123091594
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123091594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
123091594
NCBI-ProteinID:
XP_044369098
UniProt:
A0A3B6IP49
LinkDB
All DBs
Position
4B:complement(161315700..161320899)
Genome browser
AA seq
601 aa
AA seq
DB search
MAAPSRTSWADVADAEQAPPAPVPAAAPATSNGPARADRSSYVPPHLRNRSSSTAPPVSS
APPPRAAPGLLGRPTSGVGGRFGGGGAPPRRWDREPNPFGDEEEVPAEPVPFDEHQNTGI
NFEAYEDIPVETSGRDVPPAVGTFAEIDLGAALNDNIRRCKYVRPTPVQRHAIPISLAGR
DLMACAQTGSGKTAAFCFPIISGIMRGPPVQRSQRGGSRTACPLALILSPTRELSMQIHE
EARKFSYQTGVRVVVAYGGAPITQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYL
ALDEADRMLDMGFEPQVRRIVEQMDMPPRGVRQTLLFSATFPGEIQRMASDFLENYIFLA
VGRVGSSTELIAQRVEFVQEADKRSHLMDLLHAQRDSSEQGKQALTLVFVETKRGADSLE
NWLCTNGFPATSIHGDRNQQEREYALRSFKSGQTPILVATDVAARGLDIPHVAHVVNFDL
PNDIDDYVHRIGRTGRAGKSGIATAFFNDNNSSMAKSLADLMQESNQEVPAWLTRYAARP
SYGGGGGRNRRGAGGGSRFGGRDFRRESSSFGKGGGASDYAGGSSYGGGGYGGAGAPSAW
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctcccgcacctcctgggcagacgtcgccgacgctgaacaggcccctccc
gctcccgttccagcggcggcgcccgccacatccaacggccccgcgcgtgccgaccgctcc
tcctacgtccctccccacctccgcaaccgctcctcctccactgcgcctccggtgtcctcc
gctccacccccgcgcgccgcgcccggcctcctcggccgccccactagcggcgtcggtggg
aggttcgggggaggcggggccccacctcgtaggtgggaccgggagcccaaccctttcggg
gacgaggaggaggtgccggcggagcccgtgcccttcgacgagcaccagaacacggggatc
aactttgaagcgtacgaggacatccccgtcgagaccagcggccgggatgttccgcccgcc
gtgggcacgttcgcggagatcgacctcggcgccgcgctgaacgacaacattcgccggtgc
aagtacgtgcggcccacgcccgtgcagcgccatgccatcccgatctcgctggctgggcga
gatctcatggcttgcgcgcagactggatcggggaaaacggccgccttctgcttccccatc
atcagcggcatcatgcggggcccgcccgtgcagcggtcccagcggggcgggagtaggacc
gcctgccctcttgccctcatcctgtcgcccacaagagagctgtcaatgcagattcacgaa
gaggccagaaaattttcatatcagactggtgtcagggtagtggttgcatatggcggggcc
cctattacccagcagttgagagatcttgagaggggtgttgacattcttgtggctactcct
ggtcgtttggttgatttactggaaagggcaagagtatccttacagtcaattagatacctt
gcccttgatgaggcggatagaatgctggatatggggtttgagccgcaagttaggagaatt
gttgagcaaatggacatgcctccacgaggtgtaaggcagacgttattgttcagcgctaca
ttcccgggagaaatacagagaatggcatctgactttctggagaactacatattcctggct
gttggaagggtcggatcaagtactgagttgattgcccagagagttgagtttgtacaggag
gcagataaaagaagtcacttgatggatctgctccatgcgcaaagagacagttcagaacaa
gggaagcaagctctcacacttgtctttgtggagaccaaaaggggtgctgactcactggag
aactggttgtgtacgaatggatttccagcgacttctattcatggtgatagaaaccagcag
gaaagagaatatgctttgagatccttcaagagtggtcaaactccaattctagttgcaact
gatgtggcagcccggggcctcgacattcctcatgttgctcatgttgtgaactttgatctc
cccaatgatattgatgactacgtacacaggattggtcgtacagggagggcaggaaaaagt
ggaattgcgactgctttcttcaatgacaacaactcttcgatggcaaagtctctagctgac
ctaatgcaagaatctaatcaggaggtacctgcgtggctaactcgctatgcagctcgccca
tcctatggtggtggtggtggaaggaacagacgtggtgctggaggtgggagccgctttggt
ggccgtgacttccgtagggaatcttcttcctttggcaagggtggtggcgccagtgactat
gctggaggcagcagctacgggggcggtggctatggtggtgctggagctcccagtgcatgg
gattaa
DBGET
integrated database retrieval system
