KEGG   Triticum aestivum (bread wheat): 123091728
Entry
123091728         CDS       T07757                                 
Name
(RefSeq) THO complex subunit 4B-like
  KO
K12881  THO complex subunit 4
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03013  Nucleocytoplasmic transport
taes03015  mRNA surveillance pathway
taes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123091728
  09122 Translation
   03013 Nucleocytoplasmic transport
    123091728
   03015 mRNA surveillance pathway
    123091728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taes03019]
    123091728
   03041 Spliceosome [BR:taes03041]
    123091728
Messenger RNA biogenesis [BR:taes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123091728
    TREX complex
     123091728
Spliceosome [BR:taes03041]
 Complex C
  Other components
   EJC/TREX
    123091728
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123091728
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 RRM_10
Other DBs
NCBI-GeneID: 123091728
NCBI-ProteinID: XP_044369274
LinkDB
Position
4B:185567625..185569836
AA seq 268 aa
MADTLDMSLDDIITKNKHHHRRGRHNPASAASGGSAHPRRRFRSRAATRAVVAPYHQLSL
QQQVPPAFGYVAQPMAMVTAPSALDSPTKLYISNLDYNVSNEDIKELFSEMGEIQRYSIN
YDKSGRSKGTAEVVFSARSSAVAALKKYNNVHLDGKPMKIEVIGTNIEAPAPIPAIFALA
SPPGNFSFPSKSGPGMGVSGRGWSRGGGGFSGRSGGGFGGRGGGRLVGRGRGRTDRVRGK
GGVGNLELSAADLDADLDKYHSAAMQIS
NT seq 807 nt   +upstreamnt  +downstreamnt
atggcggacaccctcgacatgtcgctcgacgacatcatcaccaagaacaagcaccaccac
cgccgtggccgccacaacccagcgtccgccgcctcgggaggatccgcgcacccacgccgc
cgcttccgcagccgcgccgccacccgcgccgtcgtcgcgccctaccaccaactcagcctc
cagcaacaggtgccgccggctttcggatatgttgcccagccgatggccatggtgacggcg
ccgtctgccttggactcgcccaccaagctctacatctccaacctcgactacaacgtctcc
aacgaggatatcaaggaactgttttctgagatgggtgaaatccagcgctactccattaac
tatgacaagagtggaagatcaaagggaactgcagaggttgtattttcggcaagatcatct
gctgtagctgctcttaagaagtacaacaacgtgcatcttgatggcaaacctatgaaaatt
gaagtcattgggacaaacattgaggcacctgcacccatacctgctattttcgctttggcc
tcaccgcctggaaacttcagttttccttccaaaagtggacctggaatgggtgttagcggc
cgaggatggtctcgtggcggaggtggcttcagtggtcgcagcggaggtgggttcggtggt
cgtggcggaggtcggctcgttggtcgtggccgagggcgtacggaccgtgtgcgagggaag
ggaggggttggcaacctggaactttctgctgcagatctcgacgccgacttggacaagtac
cactcggctgcaatgcaaatcagctaa

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