Triticum aestivum (bread wheat): 123091843
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Entry
123091843 CDS
T07757
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123091843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123091843
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123091843
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123091843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
AAA_16
nSTAND3
TsaE
ABC_tran
Flavi_DEAD
Sigma54_activ_2
PhoH
Motif
Other DBs
NCBI-GeneID:
123091843
NCBI-ProteinID:
XP_044369380
UniProt:
A0A3B6INI3
LinkDB
All DBs
Position
4B:218255900..218260388
Genome browser
AA seq
1234 aa
AA seq
DB search
MAPPAAEGPGDDGLRKLEYLSLVSKVCSELETHIGVGDKVLAEFITELGRDAPSVADFDA
KLKANGADLPDYFVRTLLTIIHAILPPPSHNPSSAASQSNSKYRALSRPDDADRARELRL
ELERDANAAAATTPAPSRDRSRDDRSRDRDHDRTRDERGRDRDHDRSRDRDRGRGDRSHN
RDRAHDDRGQDRNHDRGREHDHGWDRDRDRGRDRDREGDRDGNGRRDQDRLQQRDRDTGK
AHGRSRRYVDEEDGQQERAGGRKTENTMTNSSGEPELYQVYRGRVTRVMDTGCFVKLEDV
RGGREGLVHVSQMASRRVANAKEVVKRDQEVFVKVVSVKGDKLSLSLRDVDQDTGKDLLP
MQRGVEDAPRTNPSVGSAAAAGPGRRLGLSGIVITEEDEVAPISRRPLKRMSSPERWEAK
QLIASGVLDVRDYPQFDEDGDGMLYQEEGAEEELEIELNEDEPEFLQGQSRFSIDMSPVK
IFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQ
ELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQDQRQTLPIYKLKKELIQAVHDNQVL
VVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGY
AIRFEDCTGPETVIKYMTDGMLLREILVDENLSQYSVVMLDEAHERTIHTDVLFGLLKQL
VKRRPDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITV
LQIHLTEPEGDILVFLTGQEEIDHACQCLYERMKGLGKDVPELIILPVYSALPSEMQSKI
FEPAPPGKRKVVVATNIAEASLTIDGIYYVIDPGFAKINVYNSKQGLDSLVITPISQASA
KQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGSTVLNMKAMGINDLLSFD
FMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDE
ILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFE
NFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKIRKAITAGFFFHAARKDPQEGY
RTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFYKGA
DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggcggcggagggtcccggcgacgacgggctccgaaagttggagtacctg
tcgctcgtctccaaggtctgctcggagctggagacgcacatcggtgtaggcgacaaggta
ctggctgagttcattaccgagctcgggcgcgacgccccctcggtcgccgatttcgacgcc
aagctcaaggccaacggcgccgacctccccgactacttcgtccgcacgctcctcaccatc
atccacgccatcctcccgccgccctcccataaccctagctccgccgcctcgcagtccaac
tccaagtaccgcgcgctctcgcgcccggacgacgcagatcgcgcccgcgagctccgcctc
gagcttgagcgtgatgccaatgctgcagcggcgaccacccctgccccttccagggaccgc
agtcgcgatgaccgctctcgggaccgtgaccatgaccgcacgcgtgatgaacgcggacgg
gatcgtgaccatgaccgcagtcgtgacagagaccgcgggcgtggtgatcgcagccataac
cgtgaccgtgcacatgatgaccgtggccaggatcgtaaccatgaccgaggccgtgaacat
gatcatggctgggacagggatcgagaccgtggtcgcgacagagaccgggagggagatcgg
gacggtaatggtcggagggaccaggaccgcctccagcaaagggacagggatacaggcaag
gcccatggaaggagcaggaggtatgtggatgaggaggatggacagcaggaaagggctgga
ggaaggaagacggagaataccatgacaaattcaagtggcgagcctgagctttaccaggtg
taccgggggagggtgacccgtgtaatggacaccggttgctttgtcaagcttgaggatgtt
cgtggtggccgtgaggggcttgttcatgtatcgcagatggcaagcagacgagtagccaat
gcaaaggaggtggtgaagcgtgatcaggaggtgttcgtgaaggtagtttcggtaaaggga
gataagttgagtctctcactgagggatgtggatcaggatacaggaaaggaccttctgcca
atgcagcgtggtgtggaggatgcaccaaggactaacccatctgttggtagtgctgctgct
gctgggcctggaaggagattgggtctatcggggattgtgattacagaggaggatgaggtt
gcacccatctcgcggcgtcccctcaagcggatgagctcaccggagaggtgggaggcgaag
cagctaattgcttcgggtgttcttgatgtgcgggattacccacagtttgatgaggatggt
gatggaatgttgtatcaggaggaaggcgcagaggaggagttggagattgagcttaatgag
gatgaaccagagttcttgcagggacagagcagattctcaattgacatgtcacctgttaag
attttcaagaatccagagggttcattaagtcgagcagcagctctccagactgctctcatc
aaggagcgccgtgaggttagagaacaagagcagagagcaatgctggactcgatacccaag
gatctgaataggccatgggaggacccaatgcccgacacaggcgagcgacaccttgcacag
gagcttagaggtgttggtctatcagcttatgacatgccagaatggaagaaggaagcatat
ggaaaagctttaacgtttgggcaaaggtcaaagctttcaatacaagatcagaggcaaact
cttccaatatacaagttgaagaaagagttgattcaagctgtgcatgataatcaagtttta
gttgttatcggagaaactggctctggaaagacaacgcaggtgacacaatatttggctgaa
gccggttataccacaagaggtaaaattggttgtactcaacctcgtagggttgctgcaatg
tctgttgcaaagagagtggcagaagaatttggctgtcgactgggagaggaagttggttat
gccattcgctttgaggattgcactggcccagaaactgtgataaaatacatgaccgatgga
atgcttctgcgtgaaattttagttgatgagaacctttcccagtattcagtagtcatgctt
gatgaagcgcatgaaaggaccatccacacagatgttctcttcggtttgctgaagcagctt
gttaagcgtagacctgacatgaggcttattgttacttctgctacccttgatgctgaaaag
ttctctgggtatttcttcaactgcaacatcttcacaattccgggaagaacattcccagtg
gagatactctacaccaaacaaccagaaagtgactacttggatgctgcattgattaccgtg
ctgcagatccacttgacagagccagagggtgatatcctcgttttcttgactggtcaagag
gagattgatcatgcctgtcaatgtttatatgagaggatgaaagggctgggaaaggatgtt
cccgagctcataattttgcctgtgtatagcgctctgcctagtgaaatgcagtcaaagatc
tttgagccagctccacctgggaagaggaaggtggtcgtagccaccaatattgctgaagct
tctttaaccattgatggcatatattatgtcatcgaccctggcttcgccaagatcaatgtt
tataattcaaaacaagggcttgattcattggtcatcactccaatctcacaagcatcggca
aaacaaagagcagggcgtgctggccgtactggaccaggcaaatgttatcgtctatacact
gaaagtgcttaccgcaatgaaatgtcaccaacgacgattccagaaattcaaaggatcaat
ttgggttctacagttcttaatatgaaggcaatggggataaatgacctactatcctttgat
tttatggaccccccagcaccccaagcacttatctctgctatggaacagctttacagcctt
ggcgctcttgatgaggagggccttcttaccaaactcggcagaaaaatggctgaatttcca
ctggatccaccgctttcaaagatgctactagctagcgtcgaccttggatgcagtgatgag
atactgactattatagcgatgattcaaacggggaatattttctatagacctagagaaaaa
caggctcaagctgatcagaaaagggccaaatttttccagccagagggagatcatcttact
ctacttgctgtatatgaggcttggaaagcaaagaacttttcagggccctggtgctttgag
aactttgttcagtcaagatcgctgaggagagcacaagatgtcagaaagcagcttctaact
atcatggacagatataagttggatgttgtcgctgctgggaagaacttcacgaaaataagg
aaggcgatcactgccggcttctttttccatgctgccaggaaagatccccaggaaggatac
agaaccttggtggagaaccagccagtgtacattcacccaagcagtgcgctgttccagcgc
caaccagattgggtcatttaccacgagcttgtaatgacgaccaaggagtatatgagggag
gtgaccgtggttgacccgaaatggttagtggagttagcgccaagattctacaagggtgca
gatccaaccaagatgagcaagaggaagcgacaggaaaggattgagcctctgtacgacagg
taccacgagcccaactcatggcgtctcagcaagcgccgagcttga
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