Triticum aestivum (bread wheat): 123091905
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Entry
123091905 CDS
T07757
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123091905
09122 Translation
03013 Nucleocytoplasmic transport
123091905
03015 mRNA surveillance pathway
123091905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123091905
03041 Spliceosome [BR:
taes03041
]
123091905
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123091905
Spliceosome [BR:
taes03041
]
Complex C
Other components
EJC/TREX
123091905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
123091905
NCBI-ProteinID:
XP_044369458
LinkDB
All DBs
Position
4B:241937331..241941645
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AA seq
735 aa
AA seq
DB search
MSSFPVLKNRPIDQWKVTELKDELRKRRLPVKGLKEELVRRLFESIQSEEASDESAEDVG
ANEGAPIGKDAGANGPAHQAPEEHSASQKTAVSATEVCQETRVHATQETAVPLPEVTQEI
MSSSVEQSPGDNVVATHESLSTEAPSEKGDQPEAVAGENSTVQAGHQHAESNKMHIEETP
EVVTNGTTVVADVTSADIKSDLISSEAKSDTAEASKTDKQDTLPKPVDAQIPDADPMETD
VAAASVNNDGERFVPKNDLGDNTLIDNEVCSSDLMNEDHKPIVSKSNNQVLEVSPDLGSP
IKCESISSDDISNNKKNIKDNLNANNFDLELEVKPEMFKPSSGITSLGGELQPFDDDKEL
VKNQFSLEDIDSTANVDEVCSPEKLNLDRSSGDESMEDDVMEIKQLDFSVKSGDLRGKTE
PNSSEHVKEVSLPVSLVKSSSADTKEVIAEEKPSASAEKRKFQAQETVANTEPIKRQRRW
AADSGNVPERQPLSQSGSDARKDILQPALKRSLGRSDSTASGDSPKERIVPPSQKPATTS
LRIDRFVRPFTLRAVQELLGKSGSVCSFWMDHIKTHCYVTFSSVEEATATRDAVYNLQWP
PNNGNYLLAEFVDPQEVKRKLEPPPPPPAATAVAVPISPATTPREAPLQQGQANQSVPRQ
AAATPREQLPPPPPLVKPPTSDPREKLTPTPKKAEPPVVTLDDLFRKTQSSPRIYYLPLS
DEEVSAKLAAQGKAN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattccctgttctgaagaatcgacccatcgatcaatggaaagttactgagttg
aaggatgaactgcgaaagaggaggctccctgtaaaaggtctgaaagaagaacttgtgagg
cgtctctttgaatctattcagagtgaagaggcatctgacgaatctgctgaagatgttgga
gccaatgaaggcgcacccattggcaaagatgcgggggcgaacggaccggctcatcaggca
cctgaagaacatagtgctagtcagaaaactgcagtttctgctacagaagtttgtcaggaa
actagggttcatgcaactcaggaaactgcagttcctctcccagaagttactcaggaaatt
atgtcttcctctgtggaacagtcccccggggataatgtagtggcaacccatgaatctctg
tcaacagaagccccatcagaaaaaggagatcagccagaagcagttgctggagaaaattct
acagtacaagcagggcaccagcatgctgaaagcaataagatgcacattgaggagacacca
gaggttgtcaccaacggaacaactgttgtcgctgatgtgacaagtgctgatataaagtcg
gacttgatctcttctgaagccaagtcagatactgctgaagctagcaaaactgataaacag
gacacattaccaaaacctgtggatgcccaaataccagatgctgatcctatggaaactgat
gttgcagctgcatcagtgaataatgatggggagaggtttgttcctaagaatgatttgggc
gacaatactttgattgataatgaagtgtgcagttctgacctcatgaatgaggatcacaag
cccattgtatcaaaatcaaataatcaggtacttgaggttagcccggatttagggtctcca
attaagtgtgagtcaatttctagtgatgatatatcaaataacaaaaagaatataaaggat
aacttgaatgctaataattttgatttagaactagaggttaagccagagatgttcaaacca
tcatccggcattacttccttaggtggagaattgcagccattcgatgatgataaagagctg
gtcaagaaccagttctctttggaagacattgattcgactgccaatgtggatgaagtttgc
tctccagagaaattaaatttagacaggagttcaggtgatgagtcaatggaggatgatgtt
atggagattaagcaacttgatttcagtgttaaatctggtgatctcagagggaagactgag
cctaactcctcagaacatgtgaaagaggtgtctcttcctgtttctcttgtcaagagctcc
tctgctgatacaaaggaagttatagctgaagaaaagccatcagcctcagctgaaaagaga
aaatttcaagctcaagaaactgttgcaaacaccgagccaatcaaacgtcagcgtcgatgg
gctgcagatagtgggaatgttccagaaagacaaccgttgagtcaaagtggttctgatgct
cgtaaggatattctccagcctgccttaaaacgttctcttggcaggtctgattcaacagca
agtggagattctccaaaggagaggattgtgccaccatctcagaaaccggcaacaacttcc
ttgagaatcgaccggtttgtacgcccatttaccctgagagctgtgcaagagcttcttggt
aaatctggatctgtttgtagcttctggatggatcatatcaagacccactgctatgttaca
ttctcctcggtggaggaagctacagctactcgtgatgctgtctacaacctgcagtggccc
ccaaacaatggcaattatctgttagctgaatttgttgatccccaggaagtgaaacgcaag
cttgaaccccctccccctcccccagcagcaacagcagtggcggttcctattagcccagcc
actacaccaagggaggctcctttgcagcaaggtcaggcaaatcaaagtgtgcctcgccaa
gctgctgctacaccaagggagcaattgccgcctccaccaccccttgtgaagcctcctaca
tctgatccaagggagaagctcacacccaccccaaagaaggcagaacctcctgtggtgaca
cttgatgatctcttcagaaagacacaatcctctccaaggatttactatctgcctttatca
gatgaggaggtgtcagccaagcttgctgcacagggcaaagcaaattag
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