Triticum aestivum (bread wheat): 123092118
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Entry
123092118 CDS
T07757
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123092118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123092118
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123092118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
PRP4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Nup120_160
eIF2A
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
WD40_like
Motif
Other DBs
NCBI-GeneID:
123092118
NCBI-ProteinID:
XP_044369736
UniProt:
A0A3B6IP52
LinkDB
All DBs
Position
4B:337824106..337827762
Genome browser
AA seq
509 aa
AA seq
DB search
MSMENPRPPPPAITPPMAPLPVHPPIAPIPIPVPPSTSAAADDDEVDYEVSDDHHAARER
HERAVQELLQRRRAYTMAVPTNDSAVRARLRRLGEPITLFGEREMERRDRLRALMVRLEA
DGQFDRLLRVQEDEQGAPGDDDDMEQIQYPFFTEGTNQLLQARVDIAMYSLPRAKARVDR
AKRRLADPDEDPEAEAALVVKQAGDFVLECSEIGDDRPLTGCSFSRDASMLATSSWSGII
KVWSMPQITKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNSDGSLLMSFDGHLD
RLARVAFHPSGKYLGTASFDKTWRLWDINTGTELLLQEGHSRSVYGVSFHPDGSLAASCG
LDANARVWDLRSGRLYCTLIGHVKPVLGVSFSPNGHLVATASEDNFCRIWDLRTRQMLYS
IPAHKSLISHVKFEPQEGYYLATSSYDTKAALWSTQDYKAIKCLAGHESKVTSLDISGDG
QQIVTVSHDRTIKIWSCRSTARDNEMELD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggagaaccccaggccgcccccccctgccatcacccctcccatggctcccctc
cccgtccacccgcccattgctcccatccccatccccgtcccaccctccacatccgccgct
gccgacgatgacgaggtcgactacgaggtctccgacgaccaccacgccgcgcgggagcgc
cacgagcgcgccgtacaggagctcctgcagcgccgacgcgcctacaccatggccgtgccc
accaacgactccgccgtgcgcgcgcgcctccgccgtctcggcgagcccatcacgctcttc
ggcgagcgcgagatggagcgccgcgaccgcctacgcgcactcatggtccgcctcgaggcc
gacggccagttcgaccgcctcctccgcgtgcaggaggacgagcagggagccccgggcgac
gacgacgacatggagcagatccagtatcctttcttcaccgagggtaccaaccaactgctc
caggcgcgcgttgatatagctatgtactcactgccccgcgctaaggccagggtcgacagg
gccaagcgccgcctcgctgaccccgacgaggaccccgaggcagaggccgcccttgttgtc
aagcaggcgggggacttcgtgcttgagtgcagcgagattggagatgaccgcccgctcacc
ggctgctccttctcccgcgatgcctcaatgctcgccacaagctcctggagcgggatcatc
aaagtatggagcatgccacagataactaaaattgcaaccctgaaaggtcatacagaacgt
gcaactgatgttgccttctctccagttgataactgcttagcgacagcctcagctgataaa
actgcaaaattatggaacagcgatgggtcactcctaatgtcttttgatggtcacctggat
cgtcttgctcgcgttgcttttcatccatctggaaagtaccttggtacagctagctttgac
aagacctggagattgtgggacatcaatactggaactgaacttctactccaagagggacat
agcagaagcgtatatggtgttagctttcatccagatggttctttagctgcatcttgtggg
cttgatgcgaatgctcgagtttgggatctaaggtcaggaagattgtactgtactctcatt
ggacatgtgaaacctgtcctaggagtcagcttctcccctaatggtcatctagttgcaact
gcaagtgaagacaatttctgtcgaatatgggatttgaggaccagacaaatgttatattct
ataccggcacataagagtcttatctcgcatgtgaaatttgaaccccaggagggttattat
ttagcgacatcctcctatgacactaaagcagcgctatggtcaactcaggattacaaggca
attaaatgcttggcaggccatgagtcaaaggtcactagtctggatattagtggagatgga
caacagattgtgactgtttcacatgatagaactataaagatctggtcatgcagaagcaca
gcacgggataatgagatggagttggattaa
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