Triticum aestivum (bread wheat): 123092620
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Entry
123092620 CDS
T07757
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123092620
03015 mRNA surveillance pathway
123092620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123092620
03041 Spliceosome [BR:
taes03041
]
123092620
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123092620
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
123092620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
123092620
NCBI-ProteinID:
XP_044370359
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Position
4B:446433532..446443201
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AA seq
826 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKHAKLLKTQKFASELDHQVDMSKVKMDVMKPWIATRVTELL
GFEDEVLINFIYGLLDAKEVDGKYIQIQLTGFMEKNTIKFMRELWSLLLSAQQNASGVPQ
QFLDAKEAEIQQRKAEEARIAQEIQKKREKDGRDTELAKHKMMAGDTGNSRFHGDSLGSA
LNNPNVDAEKEKELDLKHSSRTKSREHRRPRSTSLSPRGRQRSISPRRRSPSPSRQRSLR
RSASPRRSVSPRRHSPRIAPSVSRRRSPYSRRSPSVPRSPSPRRRFPIRRRSPPPGRRRS
PSPYRRRSPARAPRRSPSPARRRSPPRHRLPADRHRSPSPGRRRPRSPSPVRRRPRSPSP
RRHRPRSPGRRQSLSPHRSPQLRSPKRQRKSPISIRTLSANRPVSPQRRRSSSPHSRSPN
RSRRSLSRDAEKGTNDAPSTKGRDLAQRNQERSGRESPDFEHRRLTKSLRSPTNDAERDS
TRGSPLKDTGKHMPSQDSTNTSGDEEEGGRARENARKANSSRRISKDFSSDLQLKEVNVD
NSIPGEKPSSRSRQDGGKDVPKKYDDQLSDSSEDALDGRRMRRQGDSPDDSRVKRQSPSR
AGDSYPKDGINIDRAKTDSLGASYDAIAAKKYSGKVDEASQSDGGSPLQKAKKRTHDSKH
IDRRSSGSEESEKHRSQSEKRRHKKGHKHKKHYDDSSDSDSDSDDKESKRRRREEKKLRK
EERRLRREERHRRRADRHASKQRLKYAGSPLSDLEKDRQSGSDADVGKKGSYTPREEPDP
NKLEIELRQRALESLAKKSKHVVTPSSDVEKDRESDTDADVRKRVS
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcttcttccgggggacgtcggccgaccaggataccagattctccaacaag
catgccaagctgctcaagacgcagaagttcgcgtccgagcttgaccatcaggtggacatg
tcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtcaccgagcttctt
gggttcgaggacgaagtgcttatcaacttcatctacggcctgctcgatgcgaaggaggtg
gacgggaagtacatacagatccagctgacagggttcatggagaagaatacaataaaattc
atgagggagctgtggagcctccttctcagtgcgcagcagaatgccagtggtgtgccccag
caatttttggatgcaaaggaggctgagattcagcagagaaaggcggaagaggctagaatt
gcccaggagatccagaagaagcgagagaaagatggaagggacacagaactagctaaacac
aaaatgatggccggggatactggtaattcaagatttcatggtgattcacttggctctgct
ttaaacaatcccaatgttgatgctgagaaagaaaaggaactggacttgaagcatagctcg
agaacaaagagccgggaacatcgaagacctaggagcacatctttgtcgccccgtggtagg
caacggtctatttctccaaggaggcgctctccatccccttccagacaaagatcattgcga
cgttcagcttcacctagacgttctgtttccccccgaaggcattccccaagaattgctcct
tcagtgtctaggcggaggtcaccgtattccaggagatcaccttcggtacctagatcgcca
tcacctcggcggagatttcccattaggagaagatctccaccacctgggcgacgtagatca
ccatctccttatcgtcgtcggtccccagctcgcgcacctagaagatcaccatctcctgcg
cgtcgcagatcacctcctcgacatagattaccagcagatagacaccggtccccatctcca
ggaaggcgcaggccacggtccccatcacctgtaagacgcaggccacggtccccatcacct
agaagacataggccacgttctccaggaagacggcagtccctgtcacctcaccgctcaccg
cagttgaggtcaccaaaacgccagagaaaatccccaatttcaattaggacgctttctgca
aatcgtccagtctctccacagcggaggaggagtagcagtccacacagcaggagtccaaat
cgttcacgtaggagtttgagcagggacgcagaaaagggaacaaacgatgcaccctccact
aaaggcagggatctggctcaaaggaaccaagaaaggagtggccgagagtcaccggatttt
gaacaccgtaggctcacaaaatccttgaggtctcctactaatgatgcagaaagagactcc
acacgtggcagtcctttgaaggacactggaaaacatatgcccagtcaggacagcacaaat
accagtggagatgaggaagaaggcgggcgtgcaagggagaatgcacggaaggccaattca
tcacgcaggatatccaaggatttctcgtctgatctgcaactaaaggaagtcaacgttgat
aactcaatccctggagaaaaaccctcttccagatcaagacaggatggcggcaaggatgtc
cccaagaaatatgatgatcagctatcagattcatcagaagatgcgcttgatggtagaaga
atgagacgccagggtgattcccctgacgattctcgtgtgaaacggcagtcccctagtaga
gctggtgactcttatccaaaggatgggattaacattgatcgtgccaaaacggattcactt
ggtgcttcttatgatgctattgcagcgaagaaatactctggtaaagttgatgaagcttcc
caatcagatggtggaagtcctcttcaaaaagctaagaaaaggacacatgatagtaaacac
attgatcgtcgcagttcgggctcagaagaatctgagaaacacagatcccagtccgagaag
cgaagacataaaaagggtcacaagcacaagaagcattatgatgatagttctgattctgat
tctgactcagatgacaaggagtccaagaggaggaggcgagaagagaaaaagctgcgaaaa
gaggaaaggcgccttagacgtgaagaacggcaccgcagaagggcggaccgtcatgccagt
aaacagagattgaagtatgctggttctcccctgtcagaccttgagaaggatcgtcaatct
ggctcagatgctgatgtagggaagaaaggttcatacactccgagagaagaacctgaccca
aacaaacttgaaattgagcttcgacagagggcccttgaatctcttgcaaagaaatcaaag
catgttgttactccgtcttcagatgtcgagaaggaccgtgaatctgacacggatgctgat
gttaggaagagagtttcatag
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