Triticum aestivum (bread wheat): 123092976
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Entry
123092976 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123092976
03420 Nucleotide excision repair
123092976
03430 Mismatch repair
123092976
03440 Homologous recombination
123092976
03460 Fanconi anemia pathway
123092976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123092976
03032 DNA replication proteins [BR:
taes03032
]
123092976
03400 DNA repair and recombination proteins [BR:
taes03400
]
123092976
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123092976
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123092976
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123092976
MMR (mismatch excision repair)
123092976
DSBR (double strand breaks repair)
HR (homologous recombination)
123092976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
123092976
NCBI-ProteinID:
XP_044370784
LinkDB
All DBs
Position
4B:510284968..510288630
Genome browser
AA seq
622 aa
AA seq
DB search
MDAKSVTPGAVALILANPTPASPDDVPEIVVQVVDLKPIGSRFTFMASDGEAKVKAILST
HFASEVHSGKLQNLGLVRILNYTCNDIPQKTDKMVIITKCEVVSQALDAEIKSEVKMEEP
AALMKPKEEAAVLSKPIGVAPAAIMLKPRHDVKSASQIVSEQRGNAAPAARLAMTRRVHP
LISLNPYQGNWVIKVRVTNKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEPAKKF
YPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLSENAVVEEAEGESFIPPVQYNFVKI
DMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTISLWNDL
ATTVGEELLDMVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESE
GKGTTLTSVGAGMGASNAGGLRSMYSDRVFLSHITSDPNLGQDKPVFFSLYANISNIKPD
QTMWYRACTTCNKKVTESLGSGYWCEGCQKNYEQCSLRYIMVIKVSDPTGEAWLSLFNDQ
AERIVGCSADELDRIRKEEGDDMFQLKLKEATWIPHLFRVSVVQNEYMGVKRQRITVRSE
SPVDYAAEARYQLEEISKLTSS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagtcggtgacgccgggcgccgtggccctcatcctcgccaaccccacgccg
gcgtcgcccgacgacgtgccggagatcgtcgtgcaggtcgtcgacctcaagcccatcggc
tcccgcttcactttcatggccagcgacggggaggcgaaggtcaaggcgatcctctccacc
cacttcgcgtcggaggtccactccggcaagctccagaacctgggcctcgtccgcatcctc
aactacacatgcaacgacatcccacaaaagacggacaagatggtgattatcaccaagtgc
gaggtcgtgtcccaggcgcttgatgccgagatcaagagcgaggtcaagatggaagagcca
gcggctctcatgaagcccaaggaggaggctgcggtcctctccaagcccattggcgtggcc
ccggctgcgattatgctgaagccgaggcacgacgtgaagtccgcctcccagattgttagc
gagcagcgcggaaatgctgctcctgctgctcgcttggccatgacgagacgggtgcatcct
ctgatctccctcaacccctaccagggcaactgggtcatcaaggtgcgggtcacaaacaag
ggcaacctcaggtcatacaggaatgcccgtggagaaggccatgtctttaacgtagagctc
actgacgaggatggcacccagatccaggccaccatgttcaatgagcccgcaaagaagttc
tatcccgtgtttgagcttgggaaggtctactacatctccaaggggtcgctcagaattgca
aacaagcagttcaagacagtccagaatgactatgagatgaccctgagtgagaatgctgtt
gttgaagaagctgagggagaatctttcattccgccagtgcaatacaactttgtcaagatt
gatatgctggggccatatgttggtggcagggagttagtagatatcattggtgttgttcag
agtgtatcacctactctgagtatcagaagaaagattgacaatgagtcaatccccaagcgt
gacattgttgttgcagatgactcgaacaaaactgtcaccatttctctttggaatgatctt
gccaccactgttggtgaggaactcttggacatggttgactctgcacctatcattgcagtg
aagagcctgaaagtatctgactttcaaggtgtgtctgtttctacagtaggcaaaagcaca
cttgtgattaacccagagttgcctgagactgagaagcttagggcttggtatgaatctgaa
ggcaagggtactaccttgacatcagttggtgctggaatgggtgcatccaacgctggtggc
ttgagatcaatgtactctgacagagtttttctgtctcacatcacaagtgaccctaatttg
ggccaggataagcctgttttcttcagcctgtatgccaacataagcaacatcaagcctgac
cagaccatgtggtaccgtgcctgcaccacctgcaacaagaaggtgactgagtcactcgga
tcaggatactggtgtgaagggtgccagaagaactatgaacagtgctcattgaggtacatc
atggtgatcaaggtctctgatcccactggtgaggcctggctgtctcttttcaatgaccaa
gcagagaggatcgttggctgcagtgcagatgagcttgatcggatcaggaaagaggagggc
gatgacatgttccagctcaagctgaaggaagccacctggattccccacctgttccgcgtc
agtgtcgtgcagaacgagtacatgggagtgaagaggcagaggatcaccgtgaggagtgag
tcgccggtcgactatgccgctgaagcgaggtaccagctcgaggagatctccaagctcacc
tccagctag
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