Entry |
|
Name |
(RefSeq) THO complex subunit 4B-like
|
KO |
|
Organism |
taes Triticum aestivum (bread wheat)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:taes00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123096711
09122 Translation
03013 Nucleocytoplasmic transport
123096711
03015 mRNA surveillance pathway
123096711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:taes03019]
123096711
03041 Spliceosome [BR:taes03041]
123096711
Messenger RNA biogenesis [BR:taes03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123096711
TREX complex
123096711
Spliceosome [BR:taes03041]
Complex C
Other components
EJC/TREX
123096711
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123096711
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4D:120036840..120038918
|
AA seq |
268 aa
MADTLDMSLDDIITKNKHHHRRGRHNPASAASGGSAHPRRRFRSRAAARAVTAPYHQLSL
PQQVPPAFGYVAQPMAMVTAPSALDSPTKLYISNLDYNVSNEDIKELFSEMGEIQRYSIN
YEKSGRSKGTAEVVFSARSSAVAALKKYNNVHLDGKPMKIEVIGTNIEAPAPIPAIFALA
PPPGNFSFPSKSGPGMGVSGRGWSRGGGGFSGRSGGGFGGRGAGGFGGRGRGRTDRGRGK
GGGGNLELSAADLDADLDKYHSAAMQIS |
NT seq |
807 nt +upstreamnt +downstreamnt
atggcggacaccctcgacatgtcgctcgacgacatcatcaccaagaacaagcaccaccac
cgccgtggccgccacaacccagcgtccgccgcctcgggaggatccgcgcacccacgccgc
cgcttccgcagccgcgccgctgcccgcgccgtcaccgcgccctaccaccaactcagcctc
ccgcaacaggtaccgccggctttcggatatgttgcccagccgatggccatggtgacggcg
ccgtctgccttggactcgcccaccaagctctacatctccaacctcgactacaacgtctcc
aacgaggatatcaaggaactgttttctgagatgggtgaaatccagcgctactccattaac
tatgaaaagagtggaagatcaaagggaactgcagaggttgtattttcagcaagatcgtct
gccgtagctgctcttaagaagtacaacaacgtgcatcttgatggcaaacctatgaaaatt
gaagtcattgggacaaacattgaggcacctgcacccatacctgctattttcgctttggct
ccaccgcctggaaacttcagttttccttccaaaagtggacctggaatgggtgttagcggt
cgaggatggtctcgtggcggaggtggcttcagtggtcgcagcggcggtgggtttggtggt
cgtggcgcaggtgggttcggtggtcgtggccgagggcgtacggaccgtgggcgagggaag
ggagggggtggcaacctggaactttctgctgcagatctcgacgccgacttggacaagtac
cactcggctgcaatgcaaatcagctaa |