KEGG   Triticum aestivum (bread wheat): 123097378
Entry
123097378         CDS       T07757                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123097378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:taes03041]
    123097378
Spliceosome [BR:taes03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    123097378
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C PRP4 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_RIG_2nd eIF2A Beta-prop_WDR75_2nd Beta-prop_SCAP DUF7899 Tricorn_2nd Beta-prop_NWD2_C WD40_like Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 123097378
NCBI-ProteinID: XP_044375029
UniProt: A0A3B6JHS3
LinkDB
Position
4D:237166242..237172186
AA seq 509 aa
MSMENPGPLPPAITPPMAPLPVHPPIAPIPIPVPPSTSAAADDDEVDYEVSDDHRAARER
HERAVQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEREMERRDRLRALMVRLEA
DGQFDRLLRVQEDEQGAPGDDDDMEQIQYPFFTEGTNQLLQARVDIAMYSLPRAKARVDR
AKRRLADLDEDPEAEADLVVKQAGDFVLECSEIGDDRPLTGCSFSRDASMLATSSWSGIL
KVWSMPQITKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNSDGSLLMSFDGHLD
RLARVAFHPSGKYLGTASFDKTWRLWDINTGTELLLQEGHSRSVYGVSFHPDGSLAASCG
LDANARVWDLRSGRLYCTLIGHVKPVLGVGFSPNGHLVATASEDNFCRIWDLRTRQMLYS
IPAHKSLISHVKFEPQEGYYLATSSYDTKAAVXXXRDYKPIKCLAGHESKVTSLDISGDG
QQIVTVSHDRTIKIWSCRGTARDNEMELD
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtccatggagaaccccgggccgctcccccctgccatcacccctcccatggctcccctc
cccgtccacccgcccatcgctcccatccccatccccgtcccaccctccacatccgccgct
gcggacgatgacgaggtcgactacgaggtctccgacgaccaccgcgccgcgcgggagcgc
cacgagcgcgccgtacaggagctcctgcagcgccgacgcgcctacgccatggccgtgccc
accaacgactccgccgtgcgcgcgcgcctccgccgtctcggcgagcccatcacgctcttc
ggcgagcgcgagatggagcgccgcgaccgcctacgcgcactcatggtccgcctcgaggcc
gacggccagttcgaccgcctcctccgcgtgcaggaggacgagcagggagccccgggcgac
gacgacgacatggagcagatccagtaccctttcttcactgaggggaccaaccaactgctc
caggcgcgcgttgatatagctatgtactcactgccccgcgctaaggccagggtcgacagg
gccaagcgccgcctcgctgacctcgacgaggaccccgaggcagaggccgaccttgttgtc
aagcaggcgggggacttcgtgcttgagtgcagcgagattggagatgaccgcccgctcacc
ggctgctccttctcccgcgatgcctcaatgctcgccacaagctcctggagcgggatactc
aaagtatggagcatgccacagataactaaaattgcaaccctgaaaggtcatacagaacgt
gcaactgatgttgccttctctccagttgataactgcttagcgacagcctcagctgataaa
actgccaaattatggaacagtgatgggtcactcctaatgtcttttgatggccacctggat
cgtcttgctcgcgttgcttttcatccatctggaaagtaccttggtacagctagctttgac
aagacctggagattgtgggacatcaatactggaactgaacttctgctccaagagggacat
agcagaagtgtatatggtgttagttttcatccagatggttctttagctgcatcttgtggg
cttgatgcgaatgctcgagtttgggatctaaggtcaggaagattgtactgtaccctcatt
ggacatgtgaaacctgtcctaggagtcggcttctcccctaatggtcatctagttgcaact
gcaagcgaagacaatttctgtcgaatatgggatttgaggaccagacaaatgttatattct
ataccggcacataagagtctcatctcgcatgtgaaatttgaaccccaggagggttattat
ttagcgacatcttcctatgacactaaagcagcggtnnnnnnnnntcgggattacaaacca
attaaatgcttggcaggccatgagtcaaaggttactagtctggatattagtggagatgga
caacagattgtgactgtttcacatgatagaactataaagatctggtcatgcagaggcaca
gcgcgggataatgagatggagttggattaa

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