Triticum aestivum (bread wheat): 123097487
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Entry
123097487 CDS
T07757
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123097487
09122 Translation
03013 Nucleocytoplasmic transport
123097487
03015 mRNA surveillance pathway
123097487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123097487
03041 Spliceosome [BR:
taes03041
]
123097487
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123097487
Spliceosome [BR:
taes03041
]
Common components
Common spliceosomal components
Cap binding complex
123097487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF5798
Zw10_N
ATG14
Motif
Other DBs
NCBI-GeneID:
123097487
NCBI-ProteinID:
XP_044375178
UniProt:
A0A3B6JH53
LinkDB
All DBs
Position
4D:288140282..288158216
Genome browser
AA seq
863 aa
AA seq
DB search
MSAGWRTLLLRIGDRCPEYGGTADHKEHIEICYNVLSREYEHSKDDIFEFLLQCAEQLPH
KIPFFGVLIGLINLENEDFAKGIVDATQANLQDALHTENRDRIRILLRFLCGLMCSKVIS
PNSIIETYETLLSSAATILDEDAGNPSWQPRADFYVYCILASLPWGGSELFEQAPDELER
VLVGIQSYISIRRHFDDIAFSVFETDEGNSPNKKDFMEDLWERMQLLSRNGWKVKSVPKP
HLSFEAQLVVGKSHRFHPVSCPPPTFTMSSSEILKGQEKHEANLKYPQRLRRLHIFPTNK
AENMQPVDRFVVEEYILDVLLFFNGCRKECAFYLVSLPVSFRYEYLMAETIFSQLLLLPN
PPFRPIYYTLVIIDLCKALPAAFPSVVVAAVHALFDRISNMDTECRTRLILWFSHHLSNF
QFIWPWQEWANVKGLPKWAPQRVFVQEVLEREIRLSYFEKIKQSIEDAAELEGLLPPKAG
PNFRYHTDESKESTEGHRISKELVSMVRGRKTTRDIILWVEEQIVPANGTKFAVDVVSQT
LLDIGSKSFTHLITVLERYGQIISKLCPDEEMQLLLMDEVSAYWKNSTQMTAIAIDRMMG
YRLISNLAIVKWVFSPANVDQFHVSDRPWEILRNTVSKTYNRISDLRKEIQTLRKSIQVA
KEASAKAIKELEEAKSILEIVEGQPVSSERPGRLRRLQGFADKAKEEEVTIEESLEAKQA
LLARGLEEGKELLRLLFKSFVDVLTERLPPVSADGDVPNLRAGDPNVTFPASDPEAATME
IDDENGADNNSQVNGENMKAGYTIGELEQWCLCTLGYLKSFSRQYATEIWSHIGMLDEEV
FVGSIHPLIRKAAFSGLCRQMNQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggctggaggacgctgctgcttcgcatcggcgacaggtgccccgagtacggg
ggaaccgccgaccacaaggagcacatcgaaatctgttacaatgtgctttctcgtgaatat
gaacactccaaagatgatatttttgagtttctccttcagtgtgcagaacaattacctcac
aagattcctttctttggagttttgataggtttgataaatttagaaaatgaagattttgcc
aagggtatcgtggatgcaacacaggcaaacctacaggatgctttgcatactgaaaaccgt
gataggatcaggatattgctgcggtttctctgtggcctgatgtgcagcaaagttatatcc
ccaaattccattattgagacatacgagacacttttatcatctgctgcaactatattggat
gaggatgctggaaatccttcttggcaaccacgtgctgatttttatgtttattgtattttg
gcttcccttccatggggtggttcagaattgttcgagcaagccccggatgaactcgagagg
gttctggttggtatacagtcttatataagcatcagaaggcattttgatgatattgctttc
tcagtcttcgagacggacgaaggcaactctcccaataagaaggatttcatggaagatcta
tgggagcgtatgcaacttctttctcgtaatgggtggaaggttaaaagtgttccaaaacct
cacttgtcgtttgaagctcagttagtagttggaaaatctcaccgtttccacccagttagt
tgcccaccgcctactttcacgatgtcatcttctgagatattaaaagggcaagagaagcat
gaagccaatctaaagtatcctcaaaggcttcgtaggctccatatatttccaacaaataaa
gctgagaatatgcaacctgtagaccgttttgttgttgaggaatacatattggatgtgctg
cttttcttcaatggatgtcgcaaagaatgtgcgttttatctggtcagccttcctgtgtct
tttcggtatgaatacctgatggctgagaccatattttcacagctactattgctgccgaat
ccacctttcaggccaatctactatacgttggttatcatcgatctttgcaaggctttgcca
gctgcatttccatctgtggtggtagcagcagtacatgctctttttgatagaataagtaac
atggatacagagtgccgcaccagacttatcctatggttttcacatcatttgtcaaatttt
caattcatttggccttggcaggagtgggccaatgtgaagggcctaccaaaatgggctcca
caacgtgtttttgtccaagaagtactagaaagggaaattcggttgtcctatttcgagaaa
atcaagcagagtattgaagatgctgctgagttggaagggttgttacccccaaaagctggt
cctaatttcagatatcatacagatgaaagcaaagaaagcaccgaaggccacaggatatcc
aaggaacttgttagcatggttagaggaagaaagactacacgtgatattattttgtgggtt
gaggaacaaatagttcctgcaaatggcaccaaattcgcagttgatgttgttagtcagaca
cttcttgacattggttcaaaaagtttcacccatcttatcactgttttggagagatatggt
caaataatttccaaactatgcccagatgaggaaatgcagttattgttgatggatgaagtc
agtgcttactggaagaacagtacccagatgactgctatagctattgatagaatgatgggt
tatcgcttaatttccaacttggctatagtcaagtgggttttttctcctgctaatgttgat
caatttcatgtgtcggatcgtccatgggagattcttaggaatactgttagtaagacatac
aatcgaatcagtgatctccggaaggaaattcagacactgaggaaaagtattcaagttgct
aaagaggctagtgcaaaagccatcaaagagttggaggaggctaaatcaatacttgaaatc
gtagagggccaacctgtgtcatctgaaagaccaggcaggctgagacgacttcaaggcttt
gctgacaaagcaaaagaagaggaagtaactattgaagaatcgttagaggcaaagcaggct
ctccttgcccggggccttgaagaaggcaaagaattgcttaggttattattcaagagcttt
gttgatgtgcttactgaacgcctgccacctgtttctgctgatggagatgttcctaaccta
cgcgctggagatcctaatgtaacatttccagccagcgatcctgaagcggcaactatggag
atagacgatgaaaatggagcagataacaatagtcaagtgaatggtgaaaatatgaaagct
ggttatactattggagagcttgagcaatggtgcctgtgcacattggggtatctaaagtca
ttttctcgacagtatgcaacagagatttggtctcacattggcatgttggacgaggaggtt
tttgttgggagtattcaccctctcatccggaaagccgcattctccggtttgtgcagacag
atgaaccagtga
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