Triticum aestivum (bread wheat): 123098249
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Entry
123098249 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123098249
03420 Nucleotide excision repair
123098249
03430 Mismatch repair
123098249
03440 Homologous recombination
123098249
03460 Fanconi anemia pathway
123098249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123098249
03032 DNA replication proteins [BR:
taes03032
]
123098249
03400 DNA repair and recombination proteins [BR:
taes03400
]
123098249
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123098249
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123098249
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123098249
MMR (mismatch excision repair)
123098249
DSBR (double strand breaks repair)
HR (homologous recombination)
123098249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
123098249
NCBI-ProteinID:
XP_044376124
UniProt:
A0A3B6JK64
LinkDB
All DBs
Position
4D:414870572..414874133
Genome browser
AA seq
622 aa
AA seq
DB search
MDAKSVTPGAVALILANPTPESPDDVPEIVVQVLDLKPIGSRFTFMASDGEAKVKAILST
HFASEVHSGKLQNLGLVRILNYTCNDIPQKTDKMVIITKCEVVSQALDAEIKSEVRIEEP
AALMKPKEEAAVLSKPIGGAPAAIMLKPRHDVKSASQIVSEQRGNAAPAARLAMTRRVHP
LISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEPAKKF
YPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLNENAVVEEAEGESFIPPVQYNFVKI
DMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTISLWNDL
ATTVGEELLDMVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESE
GKGTALASVGAGMGASNAGGLRSMYSDRVFLSHITSDPNLGQDKPVFFSLYANISNIKPD
QTMWYRACTTCNKKVTEALGSGFWCEGCQKNYEQCSLRYIMVIKVSDPTGEAWLSLFNDQ
AERIVGCSADELDRIRKEEGDDMFQLKLKEATWIPHLFRVSVVQNEYMGEKRQRITVRSE
SPVDYAAEARYQLEEIAKLTSS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagtcggtgacgccgggcgccgtggctctcatcctcgccaaccccacgccg
gagtcgcccgacgacgtgccggagatcgtcgtgcaggtcctcgacctcaagcccatcggc
tcccgcttcactttcatggccagcgacggggaggcgaaggtcaaggcgatcctctccacc
cacttcgcgtcggaggtccactccggcaagctccagaacctcggcctcgtccgcatcctc
aactacacgtgcaacgacatcccacaaaagacggacaagatggtgatcatcaccaagtgc
gaggtcgtgtcccaggcgctcgacgccgagatcaagagcgaggtcaggatagaagagcca
gcggctctcatgaagcccaaggaggaggctgcggtcctctccaagcccattggcggggcc
ccggctgcgattatgctgaagccgaggcatgacgtgaagtccgcgtcccagattgttagc
gagcagcgcggaaatgctgctcccgctgctcgcttggccatgacgagacgggtgcatcct
ctgatctccctgaacccctaccaggggaactgggtcatcaaagtgcgggtcacaagcaag
ggcaacctcaggtcatacaggaatgcccgtggagaaggccatgtcttcaacgtagagctc
actgatgaggatggcacccagatccaggccaccatgttcaacgagcctgcaaagaagttc
tatcccgtgtttgagcttgggaaggtctactacatctccaaggggtcgctcagaattgcg
aacaagcagttcaagacagtccagaatgactatgagatgaccctgaatgagaatgctgtt
gttgaagaagctgagggtgaatctttcattccaccagtgcaatacaactttgtcaagatt
gatatgctggggccatatgttggtggcagggagttagtagatatcattggtgttgttcag
agtgtatcacctactttgagtatcagaagaaagatcgacaatgagtcaatcccaaagcgt
gacattgttgttgcagatgactcgaacaaaactgtcaccatttctctttggaatgatctt
gccaccactgtcggtgaggaactcttggacatggttgactctgcacctatcattgcagtc
aagagcctgaaggtgtctgactttcaaggtgtgtctgtttctacagtaggcaaaagcaca
cttgtgattaacccagagttgcctgagactgagaagcttagagcttggtatgaatctgaa
ggcaagggtactgccttggcatcagttggtgctggaatgggtgcatccaacgctggtggc
ttgagatcaatgtactctgacagagtttttctgtctcacatcacaagtgaccctaacttg
ggccaggataagcctgttttcttcagcctgtatgccaacataagcaacatcaagcctgac
cagaccatgtggtaccgcgcttgcaccacctgtaacaagaaggtgactgaggcacttgga
tcaggattctggtgtgaagggtgccagaagaactatgagcagtgctcattgaggtacatc
atggtgatcaaggtctctgatcccactggtgaggcctggctgtctcttttcaatgaccaa
gcagagagaatcgtcggctgcagcgcagatgagcttgatcggatcaggaaagaggagggc
gatgacatgttccagctcaagctgaaggaagccacctggattcctcacctgttccgtgtc
agcgtcgtgcagaacgagtacatgggcgagaagaggcagcgaatcaccgtgaggagcgag
tcaccggtcgactacgccgctgaagccaggtaccagctcgaggagatcgccaagctcacc
tccagctag
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