Triticum aestivum (bread wheat): 123098847
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Entry
123098847 CDS
T07757
Name
(RefSeq) exosome complex exonuclease RRP44 homolog A-like
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123098847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123098847
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
123098847
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
PIN_4
OB_Dis3
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
CSD2
Toxin_R_bind_C
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
123098847
NCBI-ProteinID:
XP_044376862
UniProt:
A0A3B6JNP5
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Position
4D:complement(483247541..483257206)
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AA seq
935 aa
AA seq
DB search
MLQSKSFVKKTKQGRVVKVVREHYLRDDIPCGAFSCSSCDAAARRLNADAAAILVVDTNV
VLHQIDLLENPAIEDVVVLSVVLDEVKNKNLSVYNRLKTLCTNTARRFFVFTNEHHRDTY
VKEMVGESPNDRNDRAIRVAARWYQSHLGDSAKVLLVTNDRDNKRKATEEGLNAETVESY
VRSLAQPGLLDLVVVPSSGDVAMEDVEDLRPSKRKIVYNEHKPMSEITSGLRCGIYHQGK
LRVNRYNPFEAYVGSESIGDEIIIRGSSNMNRSFDGDIVAVELLPQDQWHDSKSFIADDD
EDDNEDDVRLVPNSADDAPRNTNSTQSTVGSSAASVPSRPVGRVVGIIKRNWNSYCGSLE
PMPMPAGSGGVAHALFVSKDRRIPKIRIQTRQLGNLLNKRIIVAVDSWDVMSRYPSGHYV
RTIGDIGDKETETEVVLIENDINTRPFSTQVLACLPPLPWTLSPEDVANPNRQDLRHVRV
FSVDPPGCRDIDDALHCTPLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRATSVYLVGQ
RIDMLPKPLTEDVCSLRADVERLAFSVIWEMTPDADIISSRYTKSVIKSCAAMSYVEAQA
RMDDSRLADPLTVDLRNLNSLAKIMRNRRCERGALTLASAEVKFEIDSETHDPLDIGIYQ
IREANQMIEEFMLAANVSVAEKILQHYPLCSLLRRHPSPTKEMLEPLLRTASSVGLNLDV
SSSKALAESLDNAKRDDPYFNKLIRILATRCMTQAVYFCSGDLSLSEYYHYGLASALYTH
FTSPIRRYADVVVHRLLAAALDIAKLPPVFQDGPQLTGIADNLNYRHRNAQMASRASVEL
HTLIYFRTRPVDTEARIVKIKANGFIVFVPKFGIEGPIYLMAKGDKGADWVVDEVHQKVT
KPGTNISYAVLQSVMIHMEVVEPQPHRPKLQLTLI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagagcaagtccttcgtcaagaagacgaagcagggccgcgtcgtcaaggtggtc
cgggagcactacctccgcgacgacatcccctgcggcgccttctcctgctcctcctgcgac
gcggccgcgcgccgcctcaacgccgacgccgccgccatcctcgtcgtcgacaccaacgtc
gtgctccaccagatcgatttgttggagaatccggcgattgaggatgtcgtggtgctgtcg
gtggtgctggacgaagtgaagaataagaacctctccgtgtacaacaggctcaagaccctg
tgcaccaacacggctcggaggttcttcgtgttcaccaacgagcaccacagggatacttat
gtcaaggagatggttggagagagcccaaatgatcgtaatgatagagcaatccgtgtcgct
gctcgttggtaccagagtcacctcggtgacagtgccaaagtgctgctggtcacaaatgat
agagataacaaacggaaagctactgaagaaggcctaaatgcagagacagttgagtcatat
gtacgatcgcttgcgcagcctggtttgctcgatttggtggttgtcccaagtagcggagat
gttgccatggaagatgtagaagatcttagaccatccaaaaggaaaatagtttacaatgag
cataaacctatgtcggaaattacatctggtctgcgctgtggaatttatcatcaagggaag
cttcgagttaatcgttacaatccatttgaagcatatgttggaagtgagagcattggggat
gagattattatccgtgggagttcaaatatgaacaggtcctttgacggagatatagttgct
gtagaactcttgccacaggaccagtggcatgattcgaagtcatttattgctgatgatgat
gaagatgataatgaagatgatgtccggttggttccaaatagtgctgatgatgctccacga
aacacaaattccacgcaatcaacagttggatcatcagctgcttcagtccccagtcgtcca
gttggacgtgttgttggtatcatcaagcggaattggaattcgtattgtggatcattggag
ccaatgcccatgcctgctggtagtgggggcgttgctcatgctctatttgtgtcgaaagat
cgacgaattcctaagattcggattcaaactagacaacttgggaatcttttaaataaaagg
attatcgttgcagttgattcatgggatgtcatgtctcgatacccatcaggacactatgtg
cggactataggagatattggcgataaagaaactgaaacagaggttgtcctaatagagaat
gatattaacacaagacctttctctacacaagtccttgcttgtttgccgcctttgccttgg
acattgtcacccgaggatgtggctaatcctaataggcaagacttgcggcatgtgagagtc
tttagtgtggatccacctggttgtagggatattgatgatgcactacattgcacaccgctt
ccaaatggaaattttgaagttggagtccatattgctgatgtcactaattttgtccatcct
ggtacccctcttgatgaggaggcctctcaaagggcaacttctgtttatcttgttggacaa
cgaattgacatgctaccgaagcctctaactgaagatgtttgttctcttcgtgctgatgtt
gagaggctggcattctccgtcatttgggaaatgacacctgatgctgatatcatatcttca
agatacacaaagagtgttatcaagtcttgtgctgcaatgtcttatgtagaagcccaagca
agaatggatgacagccgtttggccgatccactgactgtagacttgcggaacttaaattca
ttagcaaagataatgagaaatcgacgttgcgaaagaggggctctgactcttgcttcagca
gaagtcaaattcgaaattgacagtgaaactcatgatcccctcgacataggaatatatcaa
attcgtgaagcaaaccaaatgattgaagagtttatgttggcagcaaatgtttctgttgct
gagaagattttgcagcactaccccttgtgttcattgctacggcgtcatcctagcccaaca
aaggagatgcttgagccattactccgtaccgcctcttctgttggcctaaatctggacgta
tcatcctcaaaagcattagctgaatcacttgataatgcgaagagagatgacccatacttc
aacaagcttatccggattttggcaactagatgcatgacacaagcagtttacttttgcagt
ggagatttgagcttgtctgagtattatcattatgggcttgcatctgctctgtacactcat
ttcacttctcctattcgcagatatgcagatgttgtggtgcataggttgctagctgctgct
ctagatattgcgaaacttccaccagtcttccaggatggtccacaactcacaggcattgct
gacaacttgaattataggcacagaaatgcccaaatggcaagcagagcatcggttgagctc
cacactcttatatatttcaggacaaggcccgtggatactgaagctagaatagtaaagatc
aaggcaaatggtttcatagtcttcgttccaaagtttggcatagaagggcccatctatctt
atggcgaagggagacaaaggggctgactgggtagtagacgaggtgcaccagaaagtaacc
aagcctggaacaaacataagctatgctgtgttgcagagtgttatgatccatatggaagtg
gtggagcctcagccccaccgccccaagctgcagctcaccctgatatga
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