Triticum aestivum (bread wheat): 123100075
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Entry
123100075 CDS
T07757
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123100075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123100075
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
123100075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
zf-P11
zf-RING_2
DUF1258
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
123100075
NCBI-ProteinID:
XP_044377998
LinkDB
All DBs
Position
4D:379715031..379719881
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AA seq
641 aa
AA seq
DB search
MGGAADLVLKAACDACGKASELYSTACRHATLCNSCAATMARSRARCNVCAAPITNVIRV
PATALGFRFRDQRHCRRRRRAWRFSALLSLTVLFVPTATQEYNVRVDTTAGKALSIAKFN
TGVPPFSKMKGAGNKWSLRKDGPTQGRQLTADMREKYYNRKPWILEDDTGEHQYQSKLEA
SQSATATYYLLIRRGKEFDAVPVGSWYNFSKIAQYKQLTLEEAEEKMNKRRSSATGYERW
MMKTATHGAAAFGSDLKDLADAKGKAANGIQSKKESNEDGNHSDKGEEDEEEGVAKKAVR
GFSTRGVDDEEDGGKEDFDLEDEIEIGDDWEHEETFTDDDEALDIDPEERPDVADAENPT
GPDIKQDDDENEQGAGGSLSKSGKELKKLLRRADGQNESDDEDDGDTDEDESPLSVLAPK
LEHQFGSEQQENNTAKLTATELAVSTPPAPRSNQKRKSGGDGAKTSNRAAVKKPKTEPEA
RTLGVKEEPPSSVEPISKASASAGSDTDMSAITEEEIIRVLRAIAPVRSQDFVPRFKARI
RTPEDKKHFHDIVMKYAYSHKTNGVSYLHLRKETTSAITEEEIIGVLSATAPVRSQDFVP
RFKDRIRTQEDKKHFHDIVMKFAYSHKTNGVSYLHLRKEYE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggggggcgccgccgacctggtgctgaaggcggcgtgcgacgcctgcggcaaggcgtcc
gagctctacagcaccgcctgccgccacgccaccctctgcaactcctgcgccgccaccatg
gcgcgctcgcgcgcgcgctgcaacgtctgcgccgcccccatcaccaacgtcatccgggta
cccgcgacggccctaggttttcgattccgcgatcaacgccattgccgccgccgccgccgc
gcttggcggttttcggctctgttgtccctgaccgttttgtttgttccaacggccacgcag
gagtacaatgttcgggtggataccaccgcggggaaggccctttccatagccaaattcaac
accggcgtgccgcccttctccaagatgaagggtgcggggaacaagtggtctcttcgtaag
gatggcccgacgcaaggccgtcagcttactgccgatatgcgggagaagtactacaacaga
aagccatggatattggaagatgatacaggtgaacatcagtaccaaagtaaacttgaggca
tcacaatctgcaactgctacatactatctgctgattaggcgcggcaaggagttcgatgct
gttcctgttggttcctggtataacttcagtaaaattgcacagtacaaacaactgactttg
gaagaagctgaagagaagatgaataaaaggagaagcagtgcaactgggtatgaacgatgg
atgatgaagacagctacacatggagctgccgcctttggttcggatctgaaggatcttgct
gatgcaaagggcaaggcggcaaatgggatccaatccaagaaagaaagtaatgaggatggg
aatcactctgataaaggtgaggaggatgaagaagagggagttgcaaagaaagctgtgcgt
gggttttctacgaggggagtggatgatgaagaggatggcggaaaagaagactttgatttg
gaggatgagattgagataggtgatgattgggagcatgaagagaccttcactgatgatgat
gaggctctggatattgacccagaggaaagacctgatgtagctgatgctgaaaaccctact
ggaccagatattaagcaggatgatgatgagaatgaacaaggagctggtggtagcctgagc
aagtccggtaaggaactaaaaaagctgctccgccgtgctgatggacaaaatgagtccgat
gacgaagacgatggagacactgatgaagatgagtcaccattgtcagtacttgctccaaaa
ctggaacatcaattcggaagcgaacaacaggaaaataacactgctaaactaacagcaaca
gaacttgctgttagcactccacctgcacccaggtccaatcaaaaaaggaaatccggaggt
gatggtgcaaaaacttcgaatcgtgcagcggtaaaaaagccaaagacagaacctgaggca
agaacattaggtgtcaaggaggagccaccctcgtccgtggaacctatttcaaaagcatct
gcttcagcagggagtgacacagatatgtctgcaattacagaggaggaaatcataagagta
cttcgtgcaattgctcctgtcagatcacaagattttgtacccaggtttaaggccagaata
agaactccagaggacaagaaacattttcatgacattgtgatgaaatatgcgtactcgcac
aagaccaacggcgtcagctatcttcaccttcgaaaggagaccacatctgcaattacagag
gaggaaatcataggagtacttagtgcaactgcccctgtcagatcacaagattttgtaccc
aggtttaaggatagaataagaactcaagaggacaagaaacattttcatgacattgtgatg
aaatttgcgtactcgcacaagaccaacggcgtcagctatcttcaccttcgaaaggagtac
gaatga
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