Triticum aestivum (bread wheat): 123103420
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Entry
123103420 CDS
T07757
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123103420
03015 mRNA surveillance pathway
123103420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123103420
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123103420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
123103420
NCBI-ProteinID:
XP_044380939
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Position
1B:complement(10232184..10236227)
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AA seq
418 aa
AA seq
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MAGRRSRSRSPSLSSSPSSRSLSSFSSVSSPSRSRSPPDRGRRSSSAARRGRSPPPPREG
AKGGRPSSPSPPPPAKKPSPSPPPARKPSPPAPDESSLVLLVSRLSRNVTEGHLREIFEN
YGEVVNVELSMDKAVNLPRGYGYVEFKMRADAEKALLYMDGAQIDGNVVKVKFAPAPGQT
AAAASLPKALPNPPKRDLPETDTVVPSLVPNAEKATQQRPKESSTQRKPLSSPQRRPAPG
GRVDSPRRRPDSPPIHPWKDPPPFRRGRTPPSLRPGYPVRRRSPSPPPRRFRSPRRFSPR
RGYVSPVRRRSPFAPRRMTPPMRMRSPPRRLPPPYRRSRSPLRRPIRSLSRSISPVRGRA
APVRRARSSSSFSESPTPPRRGAVRVPRSRSPQRPFRGRRRSASSFSNSSGSSSPIRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccggcgctcccgctcccgctccccctcgctctcctcctccccgtcctcccgc
tccctctcctccttctcctcggtctcctccccgtcccgcagccgctcccctcccgaccgc
ggccgccgcagctcgtccgccgcgcggaggggccgctcgccgccgccgccgcgggagggg
gccaagggaggccgcccgtcttcgccttcgcctccgccgccggccaagaaaccctcgccc
tctcccccgcccgcgaggaagccctcccctccggcacccgacgagtcgtcgctcgtcctc
ctcgtcagccgcctctcccgcaacgtcaccgagggccatctcagggagatcttcgagaac
tatggtgaagtcgtcaacgtggagctgtccatggacaaggcggtcaatcttcctcgtggg
tatgggtacgttgagttcaagatgagagctgatgccgagaaggcgcttctttacatggac
ggtgctcaaattgatgggaatgttgttaaagtgaagttcgcgcctgcaccgggccaaaca
gctgctgctgcttctttgcccaaggctcttcccaatcctccaaaaagagatcttcctgag
actgacacagttgttccttcccttgttcctaatgctgaaaaggccacccagcagcgaccc
aaagaatcatctactcaaagaaaaccactttcatctccccaaaggcgacctgctccaggc
ggaagggttgactcacctaggcggcgccctgattcaccaccaattcacccttggaaagat
cctcccccattcaggcgtggcagaacacctcctagcctgagaccaggatatccagttcga
agacggtctccctctccaccccctcgaaggttcagatcaccaaggcgcttttcacccaga
agaggttatgttagtccagtccgaagacgctctccattcgctcctagaaggatgacacct
ccaatgcggatgagaagtcctccaagaaggctgccacctccttatcgtcgtagcagatct
ccacttcgtcgaccaattcgctccctttccagatcaatttctcccgtcaggggtcgagca
gctcctgtgaggcgtgcgcggtcatcctcgtcattttctgaatcaccaacgccgccaaga
aggggagccgtaagggtaccgagaagtcgcagccctcaaaggccctttagagggagacgg
agaagtgcctctagcttcagcaatagtagtggttcgtcctcccctatccgccgttag
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