Triticum aestivum (bread wheat): 123103608
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Entry
123103608 CDS
T07757
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A-like
KO
K12856
pre-mRNA-processing factor 8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123103608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123103608
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123103608
Complex C
U5 SnRNP specific factors
123103608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123103608
NCBI-ProteinID:
XP_044381188
UniProt:
A0A3B6KHT5
LinkDB
All DBs
Position
5A:complement(398898934..398909870)
Genome browser
AA seq
2359 aa
AA seq
DB search
MWNGAPPPPPPMAAAPPPPGTVGAVPVPPPQAAAPPQAGQPLTPAELEAQLVEKARKWHQ
LNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAV
YKLLENMPMPWEQVRDVKILYHITGAITFVNEIPWVVEPIYLAQWGSMWIMMRREKRDRR
HFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDPEEDGAVYKWFYDHKPLVKTKLI
NGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFE
PLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVRLCIYHTPMIMYI
KTEDPDLPAFYYDPLINPITSTSKIDHREKKASEDEDEDDFSLPDGVDPLLKETPLYTDT
TAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWFKEHCPPAYPVKVRVSYQKLLKCYVLN
ELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLH
LDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADG
LQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVW
LFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAM
PEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYN
RERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWL
ESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEA
LSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFP
NWVKPADSEPPPLLVYKWCQGINNLQDIWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLL
RLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTR
ASEIAGPPQMPNEFLTYTDTKVETRHPIRLYSRYIDKVHIMFRFTHEEARDLIQRYLTEH
PDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENGFVSV
YSKDNPNLLFSMSGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRVDDEH
MKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQ
TRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSG
MSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGI
PRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQ
ALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTL
WWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQV
LDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHRWQMSKPSLVSESKDVFDQKA
SNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFG
NWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQI
IWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQL
AKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQAC
LKIEKFGDLILKATEPQMVLYNIYDDWLKSISSYTAFSRLVLILRALHVNNEKAKMLLKP
DKTIVTEPHHIWPSLTDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEI
APPSQQRQQIAEIEKQSRETPQSNAVTTRTTNVHGDELIITTTSPYEQAAFASKTDWRVR
AISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQVAGFLYGLSPQDN
PQVKEIRCISIPPQHGTHQMVTLPANLPEHEFLADLEPLGWMHTQPNEAPQLSPQDLTSH
AKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDNGSNPHSYLPTHY
EKVQMLLSDRFLGFYMVPDNAPWNYNFMGVKHDPLMKYSMKLGTPRDFYHEDHRPTHFLE
FSNIEEGEVAEGDREDTFS
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacggggcgccgccgccgccgccgccgatggcggccgcgcctcctcctccgggc
acggtcggcgctgttccggtcccgcccccgcaggccgccgcgccgccgcaggcaggccag
ccgctcacgccggcagagctcgaggcgcagctcgtggagaaggcccgcaagtggcaccag
ctcaactccaagcgctacggcgacaagcgcaagttcggcttcgtcgaggcgcagaaggag
gacatgccccccgagcacgtgcgaaaaatcatcagggaccatggggacatgtcttcgaag
aagtacaggcatgacaagcgtgtttatcttggagcactcaagtttgtacctcatgccgtt
tacaaactactggagaatatgccgatgccctgggaacaggttcgggatgttaagatcttg
taccatatcactggtgccataacctttgtaaatgagatcccgtgggtagttgagcccatt
tacctggcgcagtggggctcaatgtggatcatgatgcgaagggagaagagagataggcgg
catttcaaaagaatgcgctttcctccatttgatgatgaggaacctccactggattatgct
gataatttgttggatgttgaaccattggaggctatacaattggagttggacccagaggaa
gatggagctgtgtataaatggttttatgatcacaagcctctggtgaagactaagcttata
aatggtcccagttacaggaaatggcatctatcccttcccatcatggcaacactctatcgc
ctggctggtcaacttttgtcagacttgattgaccggaattatttctatttgtttgacatg
gagtctttctttactgccaaagcacttaacatgtgtatcccaggaggtccaaaatttgag
ccactctaccgtgatatggagaaaggggatgaggactggaatgagtttaatgatatcaac
aaactcatcatccgtcaaccacttcggactgaatacagaattgcgttcccacacttgtac
aataacaggccaaggaaagtgagactttgcatatatcatactcctatgataatgtatatc
aagacagaggatccagatttacctgcattttactatgatcctctgataaatccaatcact
tcaaccagcaagattgatcaccgggagaagaaagcaagtgaagatgaagatgaagacgac
tttagtcttcccgatggagtggaccctcttttgaaagaaactccactctacactgatacg
acagctgccggcatttcattactctttgccccaaagccttttaacatgagatctggtaga
acacgccgtgctgaggacattcctcttgtatctgagtggttcaaagagcactgcccacca
gcatatccagttaaagtccgggtgagctaccagaagctgctgaagtgctatgtgctcaat
gagctacaccataggccgcctaaagcacagaagaagaaacatctgttccgttctctgcaa
gcaacaaagttctttcaaactacagagcttgactgggcagaagctgggttgcaagtttgc
aagcagggctacaacatgctaaacttgttgattcacaggaagaatcttaactatcttcat
ttagactacaatttcaacttgaagcctgtgaagactctcacaacaaaggagagaaagaaa
tctcgttttggaaatgcattccacttgtgccgtgagattttgcgacttactaagctagtt
gttgatgcaaacatccaatttcgcttgggaaatgttgatgcctttcagttggccgatggt
ttgcaatacatattctcccatgttggtcagttgactggtatgtacagatacaagtatcgt
ctgatgcggcaaattaggatgtgcaaagatctgaagcacttgatatattatcgtttcaac
actggtcctgttggaaaaggacctggctgtggattttgggctccaatgtggagagtgtgg
ctgtttttccttcgtggtattgtacccttgcttgaaaggtggttaggtaatttactggcc
aggcagtttgaaggtcgccattcaaaaggagttgctaaaacagtaaccaagcaacgtgtt
gagtcacactttgacctggagcttcgagctgcagttatgcatgatgtccttgatgccatg
ccagagggcatcaagcaaaacaaggcccggactatactacagcatcttagtgaggcatgg
cgctgctggaaggcaaacatcccctggaaggtccctggcctgccggttcctattgaaaat
atgatacttcgttatgtgaagtccaaggctgattggtggacaaatgtcgctcactacaac
cgtgagcgtatccggcgtggtgctacagttgacaagaccgtctgccgcaaaaatcttgga
aggttaacacgtctgtggctgaaggcagaacaagagaggcagcacaattacttgaaagat
gggccatatgtgacacctgaagaggcagttgctatttatacaaccacagttcattggctc
gaatcaagaaagttctcaccgattccttttcctccactttcatacaagcatgataccaaa
cttcttatactggcactggaaagactaaaagagtcttatagtgtggcagtaaggttaaat
caactgcaaagagaggaactgggtttaattgaacaagcatatgataacccgcatgaagct
ttgtctaggataaaacggcatcttcttactcagcgtgcttttaaggaagttggcattgag
tttatggatctgtatagctacttgatcccggtatatgaaattgagcctcttgagaaaatt
actgatgcataccttgaccaatacttgtggtatgagggggacaagcgccacctcttccca
aactgggtaaagcctgctgattcagagccacctcctctacttgtttacaaatggtgccaa
ggtataaacaatttgcaggacatatgggacacgagcgatgggcagtgtgttgtgatgctg
cagacaaaatttgagaagttctttgaaaaaattgatctgactctgttgaacaggcttcta
cggttggtcctggaccataacattgctgactatgtcactgcaaagaacaatgttgtgttg
tcttataaggatatgagtcacacaaattcttatggtcttattcgaggtcttcagtttgca
tcttttgttgtgcaatactatgggctggtgctggatctcctgcttcttggtttaactcga
gctagtgagattgcagggccaccacaaatgccaaatgagttccttacatatactgacaca
aaagttgagacaaggcatcccatcaggctctattctcgatatattgacaaggtgcatata
atgttccgattcactcatgaagaagcaagggatttaattcagcgttacttgacagagcat
cctgatcctaacaatgagaacatggtcggttacaataacaagaaatgttggcctagggat
gcaagaatgaggctcatgaagcatgatgtaaatcttggaagaagtgtattttgggatatg
aagaaccgcctcccaaggagcattactacattagaatgggagaatggcttcgtttctgtg
tacagcaaggataacccaaacctgctctttagcatgtctgggttcgaggtccgtattctg
ccaaagatacgtatgactcaagaggcattcagcaacacaaaagatggtgtatggaattta
cagaatgagcagacaaaggagaggacagccattgcatttttgagggttgatgatgaacac
atgaaagtgtttgagaaccgtgtcaggcaaatccttatgtcatcagggtcaacaacattt
accaagatagttaacaagtggaacactgctctcattggcctcatgacatatttccgtgaa
gccactgttcatacgcaggaactattggatctgcttgtaaaatgtgaaaacaagatccag
actcgtataaagattggcctgaactcaaagatgcctagcaggtttccaccagttatcttt
tatacaccgaaggaaattggaggtctgggcatgttgtcaatgggtcacattttgatacca
cagagtgatctcaggtatagcaaacagacagatgttggtgtgacgcattttcgaagtggt
atgagtcatgaagaggaccagcttatccctaacttgtatcgctacatccaaccatgggag
agtgagttcattgattcacagcgcgtgtgggctgaatatgctttgaagaggcaggaagca
caatcacagaacagacgcttaacactcgaggatctggaagattcctgggatagaggtata
cctcgtatcaacacacttttccaaaaagaccgccacactttggcatatgacaaaggatgg
agggtcagaacagacttcaagcagtatcaagtgctgaaacaaaacccattctggtggaca
catcagcggcatgatggaaagctatggaacttaaacaactacagaactgacgtcatccaa
gcactcggaggtgtggaaggtatcctggaacataccttatttaaaggaacatatttccct
acctgggagggtctgttctgggagaaggcttcaggttttgaggaatcaatgaagtacaaa
aaactgacaaatgcgcagcgttctgggcttaaccagatccccaatagaagatttaccctt
tggtggtcaccaaccattaatcgtgcaaatgtatatgttggtttccaggttcagctagat
ctgacagggatattcatgcatggtaaaattccgaccctgaaaatctctctgatccagatt
ttccgtgcacatctttggcagaaggtccatgaaagtgttgttatggatctttgccaagtt
ctggatcaggagttggatgcgttggagattgagacagtacagaaagaaacaatacatccc
aggaagagttacaagatgaacagttcctgtgcagatgtcctcctttttgctgcacacagg
tggcagatgtctaaaccaagcttagtttctgagtcaaaggatgtcttcgatcagaaagca
agtaacaagtattggattgatgtgcaattacgatggggagactacgactcacatgacata
gaacgttacacaagggctaaatttatggattatacaacagataatatgtccatctaccct
tctccgactggggtgatgattggacttgatctagcatataatctgcactctgctttcggt
aactggttccctgggtcaaagcctctcctccagcaagcaatgaacaagatcatgaagtca
aatcctgccctgtatgtgctgagggagcgaataaggaagggtctccagttgtattcatct
gaacccactgagccatatctgtcttcacagaattatggagagatattcagcaaccaaatc
atatggtttgtggatgacacaaatgtctatcgtgttaccattcacaaaacctttgaaggt
aacctgaccaccaaaccaataaatggtgcaatctttattttcaatccaaggactggtcaa
ctatttcttaaggtcatccacacaagtgtatgggcaggacaaaagcgtctagggcagctg
gccaagtggaaaacagctgaggaggttgctgccttagttcgatctcttcctgtggaagag
cagccaaagcaaattattgtgacaaggaagggtatgttggatccgttggaagtccatctg
cttgacttccctaatattgttattaagggtagtgagttgcagctgccattccaagcttgc
ttgaagattgagaaattcggtgatcttattctcaaggctacagaacctcagatggttctt
tataacatatacgatgattggctgaaaagtatctcatcctacactgcattctctcgtctt
gtgcttatattgcgagcactacatgtcaataatgagaaggctaagatgttactgaagcct
gacaagacaattgttacggaaccacatcatatctggccaagtttgactgatgagcagtgg
ctcaaggtcgaatgtgcgctcagggatctcattctttccgattatgcaaagaaaaacaac
gttaatacttctgcacttacacaatctgagattcgtgatataatacttggtgctgaaata
gccccaccatcacagcagaggcaacaaatagctgagattgagaaacagtcccgagagaca
cctcagtcaaatgcagttacaacaaggacaactaatgtgcatggcgatgaactcattatc
acgacaaccagtccgtacgagcaagcagcatttgcatcgaaaacagactggcgtgtcagg
gccatctctgctacaaacttatatctccgtgtcaaccacatttatgttaactcagatgat
ataaaggagactggctatacttacatcatgcccaagaatatattgaagaagttcatatgc
atagcagatctacggacacaggttgcaggtttcctgtatggactgagtccacaggataat
ccccaagtcaaggagattagatgcatatccattcccccacagcatggaactcaccagatg
gtgactctcccagcgaatctaccagagcatgagttccttgcagacttggagccattggga
tggatgcatacccagccgaatgaagctccccagctatcgcctcaggacttgacatcgcat
gctaagattttggagaacaacaagcagtgggatggtgagaagtgcatcattttgacatgc
agcttcaccccaggatcgtgctcactgaccgcatacaaattgacaccaagcggttatgag
tggggccgtagcaacaaggacaatgggagcaacccacatagttatctcccaactcactac
gagaaggtccagatgcttctcagtgaccgcttcctcgggttctacatggttccagacaac
gcgccctggaactacaacttcatgggagtcaagcacgacccattgatgaagtacagcatg
aagctggggacgccccgagacttctaccatgaggaccacaggccgacacacttcctggag
ttcagcaatatcgaggagggcgaggttgctgagggggacagggaggacaccttctcgtag
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integrated database retrieval system
