Triticum aestivum (bread wheat): 123104767
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Entry
123104767 CDS
T07757
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123104767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123104767
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123104767
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123104767
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Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
CHASE5
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
123104767
NCBI-ProteinID:
XP_044382584
UniProt:
A0A3B6KNC5
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Position
5A:560750426..560755638
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AA seq
200 aa
AA seq
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MAATAMEHDGGAEVVVTPGELLGPSSSLEAGRGAYADGRSVRASVTGRRRFVAPAPGSSD
QRSTVEVVGHKAHGAVPQPGSVVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDV
RATEIDKVDMYQSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTSW
TEMQCELTGQIEQRKVAKVE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggcaatggagcacgacggcggcgccgaggtggtggtcaccccgggggag
ctcctcgggccctcctcgtccctcgaggccgggcgcggcgcctacgccgacggccgctcc
gtgcgcgcgtcggtcaccggccgccgccgcttcgtggcccccgcccccggctcctccgac
cagaggtccacggtggaggtggtcgggcacaaggcgcacggagccgtgccgcagccgggg
agcgtcgtcattgcccgtgtgacgaaggttatggctaggatggcttctgcagatataatg
tgtgtcgactcaaaggctgtcaaggagaagttcactggcatgataaggcaacaagatgtt
cgtgcaactgagattgacaaggtggatatgtaccagtcatatcgacctggcgacattgtt
agagctctggttctctctcttggggatgcaagggcatactacctttcgactgccaagaat
gaacttggagttgtttctgcccaaagtatagccggtggtacgctggtcccaaccagttgg
actgagatgcaatgtgaattgactggccaaatcgagcaaagaaaagttgcaaaggtggaa
tag
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