Triticum aestivum (bread wheat): 123105023
Help
Entry
123105023 CDS
T07757
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123105023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123105023
03012 Translation factors [BR:
taes03012
]
123105023
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123105023
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123105023
Translation factors [BR:
taes03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123105023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
ATPase
T2SSE
AAA_19
ABC_tran
AAA_23
NACHT
ATPase_2
AAA_16
Myosin_head
Motif
Other DBs
NCBI-GeneID:
123105023
NCBI-ProteinID:
XP_044382917
LinkDB
All DBs
Position
5A:complement(586532566..586539770)
Genome browser
AA seq
1148 aa
AA seq
DB search
MRRVLRRGLGILLVPLPGPLSRPPPIPLAALLLLPRRLDAFFRRPFCDYSGGRAVEQFSD
DEYDHEYEDHRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRRDRRDYDQIANLAKRMG
LYSELYGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGFVQEHLDRSLLPFNK
DGGKSESGSEKAEHVNLDEKQDPLLDESVMEKILQRKSLRMRNFQRSWQESPEGAKMVEF
RKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCNIICTQ
PRRISAMAVAERVSTERGENLGESVGYKVRLEGIRGKDTHLLFCTSGILLRRLLSDRNLN
GVSHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMSATLNAELFSSYFGGAPTIHI
PGFTHPVRAHFLEDILERTGYKMTASNQLDDYGQDKVWKTQRQLLPRKRKNQITTLVEDA
LQNSNFETYGSRTRDSLANWNPDCIGFNLIEAVLCHICRKERAGAVLVFMTGWDDISSLK
DQLKAHPLLGDPNRVLLLACHGSMATSEQRLIFDKAPPNVRKVVLATNMAEASITINDIV
FVMDCGKAKETTYDALNNTPCLLPSWISKASSRQRRGRAGRVQPGECYHLYPRCVYDAFA
EYQLPELLRTPLNSLCLQIKSLQVDSIGEFLSAALQPPEPRAVQNAVEFLKMIGSLDENE
NLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFLLPQDKKDLAGTA
KSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWRNFLSAQTLQAIHSLRKQFSYILK
DAGLIDSDANTNNSLSHNQSLVRGVICSGLFPGISSVVHRENSMSFKTMDDGQVLVYANS
VNAKYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGAVTKGSAAGHLKMLDGYI
DLFMDPSLSECYLQLKEELDKLVQKKLEDPTFDIHKEGKYILFAAQELAAGDLCEGRFVF
GRETSRARLRDNEDGKSNIIKDGMNPKSLLQTLLMRAGHTPPKYKTKHLKTNEFRAMVEF
KGMQFVGKPKRNKQVAERDAAIEALGWLTQTSGTKLQDEGDDSPLDLTDNMLKLLSRPRK
RTRNNPKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcgtcttgcggcgcgggctgggcatcctcctcgtcccactccctggcccactc
agccggccgccgccgatccctctcgctgctctcctcctcctcccgcgccgcctggatgcc
ttcttccgacggcccttctgcgactacagcgggggccgcgccgtcgagcagttctccgac
gacgagtacgaccacgagtacgaggaccaccggccgtcgtcgtcggtggcgaacatcgac
gagtggaggtggaagctgagcatgctgcagcgcaatgcggaggagcaggagatcatctcc
agggaccggagggaccgccgggactatgaccagatcgccaacctcgccaagaggatgggg
ctctacagtgagctgtatgggaaggttattgttgcgagcaaggtcccgctgccgaactac
aggccggacctggacgacaagcgcccgcaaagagaggtggtgatcccgctaagcttgcag
aggagggttgaaggatttgtgcaggagcaccttgaccgttcgctcttgccatttaataaa
gacggtggcaagtcagagagtggttctgagaaagctgagcatgtgaacttggatgagaag
caggatcctctgctcgacgagtcggttatggagaagatccttcagaggaagagtcttagg
atgcgcaattttcaaagaagttggcaggaatcacctgaaggcgctaagatggtagaattt
cggaaatcactcccagcatacaaggagaaggaaaggcttctagcagccattgcacgtaat
caggttatagttatttctggggagacagggtgtggaaaaacaacacagttgcctcaattt
gtgttggagtcagagatagaatctggtcgaggggccttttgtaacataatctgtacacag
ccacgaagaatatctgcaatggctgttgcagaaagagtatccaccgaaagaggagaaaac
cttggtgaatcggttggctacaaagttcgattggagggaattagaggaaaagatacacat
ttacttttctgcaccagtggtattttactaagacgattgctgagtgaccgaaacttgaat
ggagtatctcatgtatttgttgatgaaatacatgaaagagggatgaatgaagatttctta
ttgattgttctaaaggacctattgtcacggcgccgcgatctaaggttgatattgatgagt
gctactttaaatgcggaactgttctcaagttatttcggaggagcgccaactatccacatt
cctggattcacacatccagtgagggcgcattttctggaagacatattagagaggacaggc
tataagatgacagcaagtaatcaacttgacgattacggccaagataaagtgtggaagact
cagagacagctattaccaagaaaaaggaaaaatcaaattactacacttgtcgaggatgcc
cttcaaaattcgaactttgaaacctatggctcaaggacacgtgattctctggcaaactgg
aatcctgattgcatagggtttaatctcatagaggctgttctgtgccacatatgtcgcaaa
gagcgagctggtgcagttttagtttttatgaccggatgggatgacattagctctttgaag
gatcaactaaaagcgcatccgttgctaggcgacccaaatagagtgttactgcttgcatgc
catggttccatggctacctctgagcagaggctaatatttgacaaggcacctcctaatgtt
cggaaggtagtacttgccactaacatggcagaggcaagtattaccataaatgacatcgtt
ttcgtcatggattgtggaaaagcaaaggaaaccacatacgatgctctaaacaacactccc
tgcttgctcccctcatggatttcaaaggcttcttcccgtcagaggaggggcagagctggt
cgtgtccaacctggagaatgctatcatctctacccccgatgtgtatatgatgcatttgca
gagtaccagcttccagagcttcttaggactcctttgaattcactatgtttgcagataaaa
agtttgcaggttgacagcattggggagtttctatcagctgctttgcagcctccagaacca
cgagccgtccaaaatgcagtggaattcctgaagatgatcggatcattagatgagaacgag
aaccttactgatctaggaagatacctctccatgcttccagttgatccgaagttggggaag
atgcttataatgggtgcagttttccgttgcattgaccctatacttactgtggttgctgga
ttgagtgcccgggatcctttcctgttgccacaggacaagaaagatttggcaggaactgca
aaatcaagattctcagcgaaagattatagtgatcatatggcccttgtacgagcttatgaa
ggatggaaggatgctgagagggaaggatctggttatgagtactgttggaggaatttcctt
tctgctcaaacactacaagccattcattctcttcgaaagcaattcagctatatcttaaag
gacgccggtttgatagactctgatgcaaatacaaataatagtttgagccataatcaatca
ttagttcgtggtgtaatttgttctggactttttcctgggatatcatctgttgtgcatagg
gaaaactccatgtccttcaagaccatggatgacggccaagttcttgtttatgctaactcc
gtgaatgctaagtaccagaccatcccttatccatggctggtctttggtgagaaggtgaag
gtaaatgctgtcttcatccgtgattcaactggagtatcagattccatactgatcttattt
ggtggtgctgttacaaaaggaagcgcggctgggcatttgaagatgcttgatggttacatt
gatctatttatggatcccagcctgtcagagtgctacttgcaacttaaagaggaacttgat
aaacttgtacagaagaagcttgaagacccaacctttgacattcacaaggaaggcaaatac
attttatttgctgcacaagagcttgctgcgggcgacctatgtgaaggaaggtttgtgttc
ggccgagaaacgagcagagctaggcttcgggacaacgaagacggcaaaagcaacatcata
aaggatggtatgaacccaaagagcctgctgcagaccttgctgatgagggcaggccacacg
cctccaaagtacaagacaaagcacctcaagaccaacgagttcagggccatggtggagttc
aaagggatgcagttcgtcgggaagccgaagaggaacaagcaggtcgcggagagggacgcc
gcgatagaagctctgggatggttgacacaaacgtccggtacgaagctccaggatgagggt
gacgactccccgctcgacctgaccgataacatgcttaagctgctttctagaccaaggaaa
cggacgagaaataacccgaagaaatga
DBGET
integrated database retrieval system
