Triticum aestivum (bread wheat): 123106166
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Entry
123106166 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50-like isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123106166
03009 Ribosome biogenesis [BR:
taes03009
]
123106166
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123106166
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123106166
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123106166
Pre-60S particles
123106166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
123106166
NCBI-ProteinID:
XP_044384325
UniProt:
A0A3B6KUV4
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Position
5A:705331457..705335049
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AA seq
658 aa
AA seq
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MDVAGAQARALPLLLGRPAVSLRCSVSFSCGGARRSWASSATADGEDGGRDYERVAMDTP
GAYRLVDRSTGKSVIVWGGVDDGEEPGVPSPAVLSRVTADRSASKENDTAGAANVGSTAG
VGSFGRLKAQKVQALARRSAAQLKREGTSGRTSIARRSESSYADSDEDGSKSGRRKFVSD
PARRAKPNGDSRDERSRAVRSLNSVLRQYKGGDDSDFSDEEPASGPKVWGKVADVTSYRR
EDRKQKVPLDSGFFSRRTFKEIGCGDEILGALRTFGFPQPSHIQAMAYGPVLEGRSCIIA
DQSGSGKTLAYLCPIVQNLRKEEAMGIHKPSPRNPRVIILTPTAELSSQVLQNCRSISKS
GVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCAVFDEVDI
LFSEEGFEQVLHQLITVAPVTTQYLFVTATLPLDIYNKVVETFPDCEVIMGPSVHRTSAR
LEEILVDCSGNDNDEKNPETAFSNKRTALLKIIEESPVRKTIVFCNKIETCRKVENVLTR
LDRKASQIKVLPFHAALEQAKRIANMKEFLKKQTTDSMFLVCTDRASRGIDFTNVNHVVL
FDYPRDPSEYVRRVGRTARGASGDGKAFVFAVGKQVSLARRVMERNLKGHPLHDVPCF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgggggcacaggcgcgcgcgctgccgctcctcctcggccggccggccgtc
tccctccggtgctccgtctcgttctcctgcggcggcgcgcggaggagctgggcgtcctcc
gccacggcggatggggaggacggcggccgcgactacgagcgggtggccatggacacaccc
ggcgcgtaccggctcgtggaccggagcaccgggaagagcgtcatcgtgtggggcggcgtc
gacgacggcgaggagcccggcgtgccgtccccggcggtcctctccagggtcaccgctgac
cgctctgcctccaaagaaaatgacactgcgggtgcagcaaatgtggggagtactgcaggt
gtcgggagcttcggaagactgaaggcgcagaaagtgcaggctttggctaggaggtcagca
gcccagctcaagagggagggcacttctggccgcacaagcatcgcgcggcgtagtgaatct
tcttatgctgattctgatgaagatggaagcaaatctggaagaaggaagtttgtctcagac
ccggcgcgccgcgcgaaaccgaatggtgactctagggatgagaggagcagggccgtgcgt
tctctgaattctgtcctgaggcaatacaaaggcggcgatgattcagatttttctgatgaa
gagcctgcttctggccccaaagtttggggtaaagttgcagatgttacgtcttatagaaga
gaggatcggaagcagaaggtccctttggatagtgggtttttcagtcgcagaactttcaag
gagattggctgcggggatgagattctaggtgcattgagaaccttcgggtttccacaacca
tcacatattcaggctatggcatatggtcctgtcttggaggggaggagttgcattattgct
gatcaaagtgggtctggcaagacattggcatatctctgccctatagttcaaaatttaagg
aaggaagaagctatggggatccacaaaccatctcccaggaacccacgagtcataatattg
acacctactgctgaactttcttctcaggtccttcagaattgccgctcaatatcaaaatct
ggggttcccttcaggtctatggttgcaacaggtggatttcgacagaagacgcagctagaa
agccttgatcaagagctggatgtacttatagcaacacctggtcggttcttgtatctgctt
caggaaggctttgtgcagctaaataacctcagatgtgctgtgtttgatgaagtggatatt
ttatttagtgaagaaggttttgaacaagtgcttcatcagttgattactgtcgcaccagtg
accacgcaatatctttttgtcactgcaactcttcctcttgatatatataacaaggttgtt
gaaacctttcccgactgtgaggtgatcatgggacctagtgtccaccggacaagcgcccgt
cttgaagagattcttgtggactgcagtggaaatgacaatgatgaaaagaatccggaaaca
gccttttccaacaagagaacagcacttctgaagattatagaggaatctccggttcgtaaa
acaatcgttttctgcaataagattgagacatgtagaaaggttgagaatgtgctgacacgg
ctggacaggaaggcgtcacagatcaaggtcctaccgttccatgctgcgttggagcaggcg
aaacgtattgcaaacatgaaggagttcctgaagaaacagactaccgactcgatgttcctc
gtgtgcacagacagagcttcacgagggatcgacttcacgaacgtgaaccacgtggtgctc
ttcgactatccccgcgacccgagtgagtacgtccgcagggttggtaggacagcccgtggt
gcatcgggcgacggcaaggctttcgtgtttgcggtgggcaagcaggtgtccctggccagg
agggtgatggagaggaacctcaagggccacccgctgcacgacgtcccgtgcttctag
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