KEGG   Triticum aestivum (bread wheat): 123110147
Entry
123110147         CDS       T07757                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123110147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:taes03041]
    123110147
   03036 Chromosome and associated proteins [BR:taes03036]
    123110147
Spliceosome [BR:taes03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123110147
 Complex B
    123110147
 Complex C
   U2 SnRNP specific factors
    123110147
Chromosome and associated proteins [BR:taes03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123110147
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_EF3_N Htt_N-HEAT_1 XMAP215_CLASP_TOG Cnd1 Vac14_Fab1_bd Adaptin_N UME RPA_C
Other DBs
NCBI-GeneID: 123110147
NCBI-ProteinID: XP_044386543
UniProt: A0A3B6LFE8
LinkDB
Position
5B:complement(16060144..16065012)
AA seq 1290 aa
MDGIDAELARAQEERRRLEEALAAGAPMAASFVTFDKDLYGGGGGFAGYDTSIPASEDDD
APEDAEPAANPAARRLASYTGHAVAAAADVTGSGDDGGPPSASKPRRIIDREDDYRRRRL
DRGLSPERHDAFAAGEATPAPSVRTYGDAMREASALQERERTLREIARKKEGERAKEEKA
APQPPPAASTKRRNRWDQSQEGDAAAAAGAKKKARTDSDWDAPDATPGIGRWDATPGRVG
EATPSVRRNRWDETPTPGRMADADATPAAGGITPGAGATPSGAWDATPKLPGGLATPTPK
KQRSRWDETPVSMGNATPSGTAATPFGGENLATPTPGHLAAVPMTPEYYHLLRTERDIEE
RNRPLTDEELDAMFPTQGYKILEPPASYQPIRTPARKLLATPTPLSTPLYAIPEENRGQQ
FDVPKDLGPGLPLMKPEDIEFFGKLLNEDDEEQLTPEERKERKIMKLLLKVKNGTPPQRK
ASLKQLTDKAREFGAGPLFNGILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHK
ILVVIEPLLIDEDYYARAEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFS
VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLKNLVEIIEHG
LTDENQKVRTITALSLAALAEAAAPYGIESFDSVLRPLWKGTRSHSGKVLAAFLKAIGFI
IPLMDAEYASFYTKGVMPVLTREFKSPDEEMKKIVLKVVKQCVSTEGVQADYIRRQCLIS
TECLDPGCIRNHTVLSAFFKHFWVRRMALDRRNYKQLVETTVEMANKVGVTDIVGKVVED
LKDESEPYRRMVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFG
AVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLG
VVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENC
IDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLA
TLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLF
EYIGEMGKDYIYAVAPLLEDALMDRDLVHRQTAASAIKHMALGVAGLGCEDALVHLLNYV
WPNIFETSPHLINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG
AQDALVASYPALGDLGNNDIFSRPELTMFV
NT seq 3873 nt   +upstreamnt  +downstreamnt
atggacgggatcgacgcggagctcgcgcgcgcgcaggaggagcgccggaggctggaggag
gccctggcggccggcgcccccatggccgcctccttcgtcaccttcgacaaggacctctac
ggcgggggcggcggcttcgccggctacgacacctccatcccggcctccgaggacgacgac
gcgcccgaggacgccgagccagccgccaaccccgccgcgcgccgcctcgcgtcctacacg
ggccacgccgtcgccgcggccgccgacgtcaccgggtcgggcgacgacggcgggcccccc
tccgccagcaagccccggcgcatcatcgaccgcgaggacgactaccgccgccgccgcctc
gaccgcggcctctcgccggagcgccacgacgcgttcgccgcgggcgaggccaccccggcc
ccctccgtccggacctacggcgacgccatgcgcgaagccagcgcgctgcaggagagggag
cgcacgctgcgggagatcgccaggaagaaggagggggagagagccaaggaggagaaggcg
gcgcctcagccaccgccagccgcgtcgacaaaacggcgcaataggtgggatcagtcgcag
gagggcgatgctgcagctgctgccggggccaagaagaaggccaggacagactcagattgg
gacgcccctgatgcaactcctggaattgggcgctgggacgccacccctgggcgtgtcggg
gaggcgacgccctctgtgaggaggaaccggtgggatgagacgccgactccagggaggatg
gctgatgccgatgcaactccggcagctggtggcattaccccaggagcaggagccacccct
tctggggcatgggatgctactcctaagctccctggtgggcttgccacgccaacgcccaag
aagcagaggtcgaggtgggatgagactccggttagtatggggaatgcaacacccagtggc
acggcagcgacaccgtttggaggagagaaccttgccacgccgacacctggccaccttgct
gctgtcccgatgactccggagtattaccatctcctgcggacggagcgggacatcgaggag
cgaaacaggcctctcactgacgaggagcttgacgccatgttcccgacgcagggatacaag
attcttgagcctccagcttcgtaccagcccatacgcacgcctgcaaggaagctgcttgct
acaccaacgcctctgagcacaccattgtatgctattcccgaggagaatcgtgggcagcaa
tttgatgtgcccaaggacttgggtcctgggttgccactcatgaagccagaggatatagag
ttctttgggaagttgctgaatgaggatgacgaggagcagctgacgccagaggagcggaag
gagagaaaaatcatgaaactcctgctcaaggtgaagaacggcacgcccccgcagcgaaag
gcgtcacttaagcagctcacggacaaagcacgtgaatttggtgctggcccgctgttcaat
ggaatcctgccattgctcatgcagccaacgcttgaggaccaggagcggcatctcctggtg
aaggtcattgacagggtgctgtataagctggatgagctggtccgtccatttgtgcacaag
attcttgtagttatcgagccacttttgattgatgaggattactacgctcgtgctgagggc
agggagattatctcaaatcttagcaaagctgctggtcttgctactatgattgccgccatg
agaccggatattgataacattgacgagtatgtgaggaatacaactgctagggcattcagt
gtggtggcttctgctttgggtatccccgccctcctcccatttttgaaggctgtttgtcag
agtaagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctatt
ctcatgggctgtgccgttctgcctcaccttaagaacctagttgagatcattgagcatggt
ctaactgatgagaaccagaaagtgcggacaatcactgctctctctcttgctgcacttgct
gaagctgctgcgccctatggtatagaaagttttgatagtgtgttgagacctctctggaag
ggtaccagatctcacagtggaaaggtccttgctgccttcttgaaggctattggtttcatc
atccctcttatggatgctgagtatgccagtttctacacgaagggtgtgatgccagtctta
accagagaattcaagtccccagatgaagagatgaagaagattgtcctgaaggttgtgaag
cagtgtgtcagcacagagggtgtacaggctgattatatccggaggcagtgtctcatcagc
acagagtgtttagatcctggttgtatccggaatcacaccgtcctttcagcgttcttcaaa
cacttctgggttaggagaatggctctagatcgtaggaactataagcaacttgtggaaaca
acagtagagatggcaaacaaggtgggagttactgatatcgttgggaaggttgttgaggat
ctgaaagatgagagtgagccttacaggagaatggtgatggaaacaattgagaaggtggtg
gctaacttgggtgcctcggatattgatcctcgcctggaggagctgcttattgatggcatc
ctgtatgctttccaggagcagacaagtgatgatgcaaatgtcatgcttaatggctttgga
gctgttgtgaatgcgctcggccagagggtcaagccttaccttccgcagatatgtggtacc
atcaagtggcggttgaacaacaagagtgcaaaagttaggcagcaagctgctgatctgatc
tcaaggatagctattgtgatgaagcagtgccaggaggagcagcttatgggtcacctgggt
gttgtgctgtatgagtacttgggggaggagtatcctgaggtgctgggttcaattctcgga
gcattgaaggctatcgtgaatgttattggcatgactaagatgactcctccaatcaaggat
cttcttcctcgtctgacccccatcttgaagaataggcatgagaaggtccaagagaactgc
attgatctagttggtaggatagctgatcgcggagcggaattcgtaccagctcgggagtgg
atgaggatttgttttgagctgctggaaatgttgaaggctcacaagaagggtatcagaaga
gccactgtgaacacatttggttatattgccaaggcaatcgggcctcaggacgtgttggcc
actctgttgaacaacctgaaggtgcaggagcgacaaaaccgtgtttgcacgactgtagca
attgctattgttgctgaaacttgctcgccgttcacagttctgcccgccctcatgaatgag
taccgggttccggagctcaatgtccagaatggtgttttgaaatctctctctttcctcttt
gagtatattggtgagatgggcaaagattacatatacgccgtcgctcccttgctcgaagat
gcactgatggacagggatctggttcacaggcagacggccgcgtctgccatcaagcatatg
gctctaggagttgctggcttgggctgtgaggatgctctcgtccatttgctcaactatgtc
tggcccaacatatttgagacatctccccatctcataaatgccgtcatggaggccatcgag
gggatgcgggttgctctaggcgcagccgtggttctgaattattgccttcagggcctcttc
catccagcaaggaaagtacgcgaagtatactggaagatctacaactcgctgtatatcggc
gcgcaggacgcactcgtggcttcttatcctgcactaggcgatcttggaaacaatgacatc
ttcagccgtccagagctaaccatgttcgtgtga

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