Triticum aestivum (bread wheat): 123111060
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Entry
123111060 CDS
T07757
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123111060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123111060
03036 Chromosome and associated proteins [BR:
taes03036
]
123111060
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123111060
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123111060
PBAF complex
123111060
GBAF(ncBAF) complex
123111060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF4428
Motif
Other DBs
NCBI-GeneID:
123111060
NCBI-ProteinID:
XP_044387671
LinkDB
All DBs
Position
5B:215583365..215600595
Genome browser
AA seq
786 aa
AA seq
DB search
MPRKASSSSDAKLKWRKRKRSQDTSPSKQSGGADHSDDSDSAAANDEDDALHGSANGGET
LGARGGGDDTVPDLREAEVLSSAEPVSGFPSATRRTISRLHPSVLAVIAADRALAAGASC
ASAPPAPALENISHGQLQVLAAMLPDHPSLSNDPDKPSSYVCTVPPLMECQGVPKQFYSK
LLVVPRHADWFSPATVHRLERQVVPHFFSGKSPGHTPEKYIMLRNKVIVKYLERPSRRLA
FAECQGLVTSTAELYDLSRIVRFLDTWGIINYLAAGSVHRGLRLASSLIREEQTGELQLA
SAPLKSIDGLILFDRPKCSARAEDIASVASTSSALEVPNGDTGFADLDEKIWERLSENFC
SYCSQPLPSLHYESQKEADIALCSDCFHDARFVPGHSSLDFQRVDGTKDGSDNDGDSWTH
EETLLLLEGLEKYNDNWNAIAEHVGTKSKAQCIHHFIRIPVEDGLLESIEVPEASVSSRV
QSNGFSYSNSNGGISGSVPQSSQPGQQLPFVNSANPVMSLVAFLASAVGPRIAASCANAA
LSVLTRDDSRMCSEGNDVMGQAARPNYDASSSVSPENVKYAAMCGLSAAATKCKLFADQE
EREIQRLAATIINHQLKRLELKLKQFAEVETLLLKESEQVERARQNLTAQRVRFMSARFA
SSGGPMPGGSSSTMASNPMNQASPRPPAMPGSMPPASMQAFYGNNMQGHPAQMAFLQQQQ
RQQQQQQQQQMLSFGPRLPLSAIHPGSSSSAAPSVMFNTGMPSSATPNHHSMLRPPPSGS
NNSSFG
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggcctcgtcctcctcagatgcgaagctcaagtggcggaagcggaagcgc
tcacaggacacctccccatcgaagcagtccggcggggccgaccactccgacgactctgac
tccgcagcggcgaacgacgaagacgacgcgctccacggctccgccaacgggggcgaaacc
ctaggcgcccgtggcggcggtgacgacaccgtgcccgacctccgggaggcggaggtgctc
tcctcagcggagcccgtctctggcttcccctcggctacccgccgcactatcagccggctc
catccctctgtgcttgcagttatcgccgccgatcgtgccttggcggctggtgccagctgt
gcttcggctccgcctgcacccgcgctggagaacatttcgcacgggcagctccaggtgcta
gcagccatgctccccgaccacccatccctgtccaacgaccctgacaagccgtcctcctat
gtctgcaccgtgcctccactcatggaatgccaaggcgtgcccaagcagttctacagcaag
ttactcgtcgtccccagacacgcagattggttctcgccggcgacggtacacaggttggag
aggcaggtggtgccacatttcttctcagggaagtccccagggcatacaccagagaagtac
ataatgctgaggaataaggtgattgtgaagtatttggagcgcccgtcgaggagacttgca
tttgctgagtgccaggggcttgttacaagcacggctgaattgtatgacctgagtcggata
gtcaggttcttggacacttgggggattattaattacctcgctgctggatctgtgcaccgg
ggcttgaggctggcatcatctttaatcagggaggagcaaacaggggagctgcagctggcg
tctgcaccattgaagtcaattgacggtctgattttgtttgatcggccaaaatgcagtgcc
cgagcagaggatattgcttctgtggcatcaacttcgtctgctctggaggtgccaaatggt
gatactggctttgcagacttggacgaaaagatttgggagaggctgtctgagaacttttgt
agttattgttcacaacctttgcccagtttgcactatgaatcacaaaaggaggcagacatc
gctctttgctcggattgcttccatgatgcaagatttgttcctgggcactcaagcttagat
tttcagagagtggatggaacgaaagatggatcagacaatgatggggacagctggactcac
gaggaaactttactgttgctggagggcttagagaagtacaatgataattggaatgctatt
gctgaacatgtcggaacaaagtctaaggcgcagtgtattcaccattttattcgtattcca
gtggaagatggtctgttagaaagcattgaagtaccagaagcatccgtttcatctagagta
caaagcaatggcttttcgtattcaaattccaatggcggcatttcaggtagcgttcctcaa
agtagccaacctggacaacagctaccatttgttaattctgctaatccagtcatgtcactg
gttgcatttttggcctctgcagtaggaccaagaatagcagcatcctgtgcaaatgcagca
ttatctgttttgacaagagatgattccaggatgtgttcagaaggcaatgatgtcatgggt
caagctgctcgtccaaactatgatgcctcatcatccgtctctcccgaaaacgtcaaatac
gctgcaatgtgtggcttgtcagcagcggcaacaaagtgcaaactttttgcagatcaggag
gagcgtgaaattcagagattagcggccaccatcataaatcaccagttaaagagattggag
ttgaagctgaagcaatttgcagaggtggagaccttgcttttgaaggaaagcgagcaggtt
gagagggccaggcagaatcttacagcccagcgtgtccggtttatgtcagctcgatttgct
tcctccggaggtcccatgcccggaggcagcagcagcaccatggcatcaaatccaatgaat
caagccagccctcgaccaccagcaatgccaggctcaatgcctccggccagcatgcaagcc
ttctacggaaataacatgcaggggcatccagcccagatggctttcttgcagcagcaacag
cggcaacagcagcagcagcagcagcagcagatgctctcatttgggccgcgcctgccgctc
tcagctatccaccctggctcatcgtcatcagcagcacccagcgtcatgttcaacactggc
atgcccagttcggctacccctaaccatcactccatgctgagaccaccaccctcggggagc
aacaattcaagttttggttaa
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