Triticum aestivum (bread wheat): 123111083
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Entry
123111083 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123111083
03420 Nucleotide excision repair
123111083
03430 Mismatch repair
123111083
03440 Homologous recombination
123111083
03460 Fanconi anemia pathway
123111083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123111083
03032 DNA replication proteins [BR:
taes03032
]
123111083
03400 DNA repair and recombination proteins [BR:
taes03400
]
123111083
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123111083
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123111083
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123111083
MMR (mismatch excision repair)
123111083
DSBR (double strand breaks repair)
HR (homologous recombination)
123111083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_2
zf-CCHC_5
DUF936
DUF223
BRCA-2_OB1
RMI1_C
Motif
Other DBs
NCBI-GeneID:
123111083
NCBI-ProteinID:
XP_044387701
UniProt:
A0A3B5YT85
LinkDB
All DBs
Position
1B:complement(118432737..118440508)
Genome browser
AA seq
881 aa
AA seq
DB search
MEAPPPLTAGAVTEIWELPNGPATFQPVLQVADLRPVVAKNTTAAAAAAQHSERFRMLLS
DGVHSQQSMLGTGLNDLIKDGTLRVGSIVHLTDMTCNTIQKRRIVIVVKLEVLQSECPKI
GTPKTYEKSLPEGQEPNLPANAAQTNSGNYSGGPGMLGSAVAPRVEQIGNNLSYGRPNNG
GPGVDSSICQSVQPGANNVLSGGTYGTMSAQNTMNANVVQPNSHQNQSFVVPGTGGGFGP
PRNIYGRPAQSSYQQPPPPHRNSGPVAKNEAASRVIPISALNPYQRTWTIKARVTAKAHV
KNFNNARGPGKVFSFDLLDANGGEIRATCFGAAVDQFYDLIEVDKVYLVSRGSLKPANKR
FSPLNNDYEINLEPSSSIEVCSGDDSSIPKQQFNFRQISEIANMDKDTTVDLLGVVTSVR
PSFTVMLKNGGETQKRVLQLKDMSGCSVEMTFWGNFCDAEGQQLQSLCDSGLNPILALKS
GRVGEFNGKTVGTTSSSLLKINPDFPEAERLRQWYITEGKIAACTSLSGEMSSMGRTDIR
KKTAQIKDERMGQSEKPDWITVQGAISQIYTDNFCYPACTREVNGKSCNKKVTNNGDGMW
LCEKCDQSSETCEYRYLLSCHIQDHTGSTHATSFQEAGQEIIGLSAQDLFRIKHEEQDDV
RFAEIIQQVRFQQYLFKLKVKEEVYNDEPRVKCNIVKAERYDPVKESRFFLGAIDSLLAE
DASGSSPGLNGGPAVNAGFANSEAGQSVPASNNSYAVNMGGPNQFGQQFSASRGMPTAPS
ATPAAGSGFAVNSYGPSAANASSGLCFKCNQPGHFSRDCPGQAASYSSSVGGNANSGLCF
KCNQPGHFARDCPAQAAGHQHQTYANGAASGGYNRQSYVGS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgccgccgctgacggcgggcgcggtgacggagatatgggagctcccgaac
gggccggcgacgttccagccggtgctgcaggtcgcggaccttcgccccgtcgtcgccaag
aacacgaccgcggcggcggccgcggcgcagcactcggagcggttccgcatgctgctctcc
gacggcgtccactcccagcagtccatgctcggcaccggcctcaacgacctcataaaggac
ggaaccctccgcgtcggctccatcgtccacctcacggacatgacgtgcaacaccatccag
aaacgcaggatcgttattgttgtcaaacttgaagttctccaaagtgagtgccccaaaatt
gggacaccaaagacttatgagaaaagcttacctgagggacaggagcctaacttaccggcc
aatgctgctcaaacaaacagtggaaactattctggtggcccaggcatgctggggtctgca
gttgctccaagggtggaacagattggtaacaatctgtcatatggtagacccaacaacggt
ggcccaggcgtggactcttcaatttgtcagtctgttcaacctggtgctaacaatgtgttg
tctggtggaacttatggtacaatgtcagcacagaacacaatgaatgccaatgtggtgcag
ccaaactctcatcaaaaccaaagttttgtggttcctggcacaggtgggggctttgggcct
cctcgcaatatatatgggcgccctgcacagtcttcatatcagcagccacctccaccccat
agaaatagtggcccagttgctaaaaatgaagctgcttctcgtgttattccaatttctgca
ctgaacccataccaacgtacatggacaataaaggctagggtgactgcgaaggctcatgtc
aagaacttcaataatgcaagaggtccaggaaaagtcttctcctttgatctccttgatgca
aatggtggagaaattcgtgcaacatgctttggcgcggcagttgatcagttctatgactta
attgaggttgataaggtgtacttggtatctaggggatcgctaaaacccgcaaacaagagg
tttagccctttaaacaatgactatgaaataaaccttgagccttcatcatctatagaagtt
tgttctggtgatgatagcagcatccctaagcagcagttcaattttcggcagatcagcgaa
attgcaaacatggataaagataccacagtagacttgcttggggttgttacttcagttagg
ccttcttttacagtaatgcttaagaatggcggggaaacccagaaaagagtccttcaactg
aaggacatgtctggttgcagtgtggaaatgaccttttggggtaacttctgtgatgctgaa
ggtcagcagctgcagtcgctgtgcgattctggtttgaatcctatacttgcgctgaaatct
ggtcgagttggtgaattcaacggcaaaacagtgggtacaactagctcaagtttgttaaaa
ataaatccggatttccctgaagctgaaaggctgaggcagtggtacataactgaaggaaaa
attgctgcctgcacttctttatctggggaaatgtcaagcatgggcaggactgatatccgg
aaaaaaactgcacagatcaaggatgaacgcatggggcaatcagaaaagcctgattggatc
accgttcaaggtgcaatttcacaaatctacactgataatttttgttacccagcatgcacc
agggaggttaatggtaaaagctgcaacaaaaaggtaacaaataatggtgatgggatgtgg
ctatgtgagaaatgcgatcagagctctgaaacttgtgagtatagatacctgctgtcatgc
catatccaggatcatactgggtccacccatgcaacttcattccaagaggctggccaggag
attatcggcctctcagcacaagatcttttcaggataaagcatgaagagcaagatgatgta
cggtttgcagaaatcatacagcaggtccgatttcagcaatacctattcaagctgaaagtc
aaggaagaagtctataatgatgagccgcgtgtgaagtgcaacattgttaaggctgaaaga
tacgacccagtgaaagagagtcgtttttttctgggggccattgatagccttttggcggag
gacgcttcaggctcttctcctgggctgaatggtggtcctgctgttaatgctggcttcgcc
aactcagaagctggacagagtgtgccagcttccaacaattcctatgctgtgaatatgggt
ggcccaaatcagtttgggcagcaattcagcgcatctcgcgggatgccgactgcaccatca
gcgacaccagcagcaggtagcggcttcgcggttaattcctatggtccttcagctgccaat
gccagctcaggcttgtgcttcaaatgtaaccagcctgggcacttttcaagagactgtcca
gggcaggctgcctcctacagttcttcggttggcggcaacgccaactctggtctgtgcttc
aaatgtaatcagcctgggcacttcgcgagagactgtccggcacaggctgctggccaccag
caccagacgtatgcgaatggcgccgcatcaggaggatacaacaggcaatcctatgttggt
agttaa
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