Triticum aestivum (bread wheat): 123111455
Help
Entry
123111455 CDS
T07757
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123111455
09124 Replication and repair
03420 Nucleotide excision repair
123111455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123111455
03036 Chromosome and associated proteins [BR:
taes03036
]
123111455
03400 DNA repair and recombination proteins [BR:
taes03400
]
123111455
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123111455
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123111455
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123111455
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123111455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
NAMPT_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
123111455
NCBI-ProteinID:
XP_044388198
LinkDB
All DBs
Position
1B:complement(125336744..125344444)
Genome browser
AA seq
758 aa
AA seq
DB search
MKFDLEGLTVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYS
LANPSRPLRLLYCTRTVHEMEKTLAELRLLFSHLPPAASRSLLALGLSSRKNLCVHPQAS
ASAARDSVDTACRRLTASWVRDKAASDPESTPLCEFFESFDRAAAAGDLASFMPPGVYTL
ADLRSLGRERRICPYFLARQMVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVFDEAH
NIDNVCIEALSVSVRKQTLEGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLAQRGN
LPISDAWLANPSLPDDILKEAVPGNIRKAEHFLAVLKRLVKFLDGRLETENVENEMPVSF
VASIHSQAGIDQRMLRFCYDRLHSLLLTLEITDTDEFMHIQTICDFATLIGTYSRGFSII
IEPYDDRMPEVRDPVIQLSCHDASLAIQPVFDRFQTVVITSGTLSPIDLYPRLLNFNPVI
SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASSVPDGIVC
FFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRGAVFF
SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILRARLEYLRETFQIKEGDFLTFDAL
RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHTA
REFLRRMAQPYDKAGSGGKKTLLTEEDLQDMARDAMEM
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgatcttgaaggcctgacggtgcacttcccgtacgcggcgatctacccggag
cagcacgcgtacatgggcgagctcaagcgagccctggacgcgcgcggccacgcgctgctg
gagatgccgacgggcaccggcaagacggcggctctcatctccctcatcacctcctactcc
ctcgccaacccctcccgcccgctccggctcctctactgcacccgcaccgtccacgagatg
gagaagaccctagccgagctccgcctcctcttctcccacctcccgcccgccgcctcgcgc
tccctcctcgcgctcggtctctcctcccgcaagaacctctgcgtccacccccaggcctcc
gcctccgccgcccgcgattccgtcgacacagcctgccgccgcctcaccgcgtcctgggtc
cgcgacaaggccgcctccgacccggagtccacccctctctgcgaattcttcgagtcattc
gaccgggccgcggccgccggcgacctcgcctctttcatgccccctggggtctacactctt
gccgacctccgttcgctcggccgtgagcgccggatatgcccctacttcctcgccaggcag
atggtaaaatacgccaatgtggtggtctacagctaccagtacctgcttgaccccaaggtg
gccagcattgtgtcccgggagatgcagaaggaatgcgtggttgtgtttgatgaagcgcac
aacatcgataatgtctgcattgaggcgctgagcgtcagcgtccgcaagcagacactggaa
ggtgccgagcgaaacctgcggcgcatctcgcaagagatcgataggttcaaggccaccgat
gccaataggcttcgtgctgaatacaatagactggtggatggattggcacagaggggaaat
ctgccaatatccgatgcctggcttgcaaatccatccttgcctgatgacattttgaaggag
gctgtacctggaaatatcaggaaggctgaacattttcttgctgtcttgaagagacttgtg
aaattcttagatggacggcttgaaacagagaatgttgaaaatgaaatgcctgtttccttt
gttgcttcaatccattcccaggctggaattgaccagagaatgctgaggttttgttatgac
cgcttacattcactattgcttacattggagataaccgacacggatgaattcatgcacatc
cagaccatttgtgactttgccacattgattggaacttattcgcggggtttttctataata
atagaaccctatgatgatagaatgcctgaagttcgtgatcccgtgattcagcttagttgc
catgacgcttcactcgcaatacagcctgttttcgatcgtttccaaactgtggtcatcact
tcgggaactctcagcccaattgatctgtaccctcgacttttgaattttaatcctgttata
agcaggagcttcacaatgtccctaacaagggattgtatatgtcccatggtgttgacacga
ggaagtgatcagctacctgtgagcacaaagttcgacatgcgcagtgatcctggtgttgtg
aggaattatggccgcctcttgctagaaatggcttcttctgttcctgatggcatcgtctgt
ttctttgtcagttacagctatatggatggcattgtcaacagctggaatgaaatgggtatt
ttacaggacatcatgcagcacaagttggtattcattgaaacaccagatgttgttgaaaca
acattggcccttgacaattacagaaaagcatgtgattgtggaagaggtgctgtcttcttc
tcagttgccaggggcaaagttgctgaaggtattgattttgatcgacactatggcagactt
gtgatcatgtttggtgttcccttccagtacacacttagcaagatattgcgtgctaggttg
gagtacctaagagaaacttttcagataaaggagggtgactttctgacatttgacgcattg
aggcaagctgctcaatgtgttggccgtgtgattcgttctaaggcagattatggaatgatg
atatttgctgacaagagatacagtcggcatgataaacggtccaaactgccaggatggata
ctgtcacacttgcacgatgcgcacctgaacctgagcaccgatatggctctccatacagcc
cgtgagttcctccggaggatggcgcagccatacgacaaggctgggagcggagggaagaag
acactgttgacggaggaggacctgcaggacatggctcgggacgccatggagatgtga
DBGET
integrated database retrieval system
