Triticum aestivum (bread wheat): 123111498
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Entry
123111498 CDS
T07757
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123111498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123111498
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123111498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP_TPR_like
RVE6
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
123111498
NCBI-ProteinID:
XP_044388236
UniProt:
A0A3B6LKG3
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Position
5B:complement(297917218..297924126)
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AA seq
819 aa
AA seq
DB search
MEPAAPKEAPPPQAQPGVEDGTLSATAAMARDAAVLFQSRRYAECADVLAQLLLKKEGDP
KVLHNMAIAESFVDGCPDPKKLLEILGNVKIRSDELACASREQADSANGVGNNTSSEPRG
SGIAPLISAAHNATAYGDEFDTTIITFNTALILYHLHDYESALSVLEPLYRNIEPIDETT
ALHVCFLLLDITLALQDASKAADVIQYLERSFGVANTGNQNEIASTVQQQPAQPKPAKSN
TPPDSDSNTCPGGSEILSVGSFSDDTLEFESFYSTLDGGNHLGRPILNEFSRASADLAAT
AADLKVRLQIYKVRLLLLTRNLKVAKRELKVLMNMARGRDSSTELLLKSQLEYARGNYRK
AVKLLSTPNNRTEPVMLAMFYNNLGCILHQQRSNHTSVLCFSKALKYSLSLRSEKPLKLS
ALSQDKSCLISYNCGIQHLMCGKPLLAARCFREAMPLLYHRPLFWLRFAECSLLALEMGF
LTASGATSCKDEIEIYVVGSGKWRHLVISPVNSGSHLSDFGSSGEHENLISLRFARQCLL
NAQLLMDASEQKKMVISDTEECNQGSQCQKSSGQNTMSVESKVHSGPTTNANGEQKGAAS
LNATLQSSLAMYDDIIRKENLKIRQAILGDLAFVELCLENPLKALSTANSLLQVPDCSRM
YLFLGHVYAAEALCLLNRLKEAVDQLTVYLRDDNAIELPYSVENREKAPVEKDSDGEDSV
TPAMTKLTSEESQHSMSLKPEEACGVLYVDLGMTAAVQGELEQANYLVSRGFAMLPNSPR
ALLASIYVDLLQGKVQEAIGKLRRCRNVRFKTSSVAASR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcggcgccgaaggaggcgccgccgccccaggcacagcccggggtggaggac
gggacgctctccgcgacggcagctatggcaagggacgccgccgtgctgttccagagccgc
cggtacgccgagtgcgccgatgtgctcgcgcagctcctgctcaagaaggagggtgacccc
aaggtccttcataatatggcaatcgcagaatcgtttgtggatggttgtcctgatccaaaa
aagctgcttgagattcttggcaatgttaagataagaagcgatgaacttgcctgtgcatct
agagaacaagctgattctgccaatggggtagggaacaatacttcttctgaaccaagaggc
agtggcattgcaccgttgatttctgctgcacataatgcaacagcctatggagatgagttt
gacacaaccataataacattcaacactgctcttatcctttatcatcttcatgattatgaa
tctgcactgtctgttttggagccattgtaccgaaatattgaaccaattgatgagacaact
gctcttcatgtatgttttctgttattggatattacattagctttgcaagatgcatcaaaa
gccgcggatgtcattcagtacttggaaagatcatttggagtagctaatacagggaaccag
aatgaaattgctagcacagttcagcagcaacctgctcaaccgaaacctgcaaaaagtaac
acgcctccagattctgattcaaatacttgtcctggtggatctgagattctttcagttgga
agtttttcggatgatacactggagtttgaatcattttactctactctggatggtggaaat
cacttgggcagacctatcttaaatgagttctcaagggcatcagctgatcttgctgccaca
gctgctgatttgaaagttagactacaaatttacaaggtccggcttctacttctcacaagg
aacctgaaggttgccaagcgagaactcaaagttctaatgaacatggcacgtggtagggat
tcatctacagagcttctcttgaaatctcagctagagtatgcccgaggaaattatcggaag
gctgtgaagcttttgagcactcccaataatcggactgaaccagtaatgctagccatgttc
tacaacaatcttggttgtatactccatcagcagagatccaaccatacatcagtattgtgc
ttcagcaaagcactgaaatacagtttatctcttcgctcagagaaaccattgaagctgtct
gcactatcacaagacaaatcttgtctgatatcatacaactgtgggatccaacatttgatg
tgtggtaaaccactgttagcagctcgttgttttcgtgaggccatgccgctcttgtaccat
cgccccctcttttggctccgttttgctgagtgtagcctgctagctctagaaatgggcttc
ctcactgcaagcggtgctacttcatgcaaagatgagattgaaatttatgttgtggggtca
gggaaatggcgtcatttagttatcagtccggtgaactcaggaagtcatttatcagatttt
gggagttcaggtgaacatgaaaatttgatatcactcagatttgctagacagtgtctactc
aatgcccaactattaatggatgcttctgagcagaaaaaaatggtgatttcagatacagag
gagtgcaaccaagggtcacaatgccagaaaagttcaggccagaacacaatgagtgtggaa
tccaaagtccactctggtccaacaactaatgcaaatggagaacaaaagggagccgcgagc
ttgaatgccactttgcagagctctcttgctatgtatgatgacatcattagaaaagagaac
ctgaaaattcgacaagccatcctgggggacctggcgtttgtcgaattgtgtcttgagaat
cccttaaaagctttgtctactgccaactcactgttgcaggttccagactgctccaggatg
tacttattccttggccatgtatatgcagctgaagctttatgtttgctgaacaggctaaag
gaggctgttgatcagttaactgtttatttgagagatgacaatgctattgagttgccctac
agtgttgagaatcgtgaaaaggcccctgttgagaaagacagcgatggcgaggattcagtc
actcctgccatgacaaaacttacctcagaagaatctcagcactcaatgtctctcaagccc
gaggaagcctgtggggttctgtatgttgaccttggcatgactgctgcagtgcagggagag
cttgagcaggccaattacctggtgagccgtggttttgcaatgttgcccaacagccctagg
gcactgctagcatccatctatgtggatcttctgcaagggaaggtgcaagaagctatcggc
aagttgagaaggtgcagaaacgtgagatttaagaccagtagtgtagcagccagcagataa
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