Triticum aestivum (bread wheat): 123111500
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Entry
123111500 CDS
T07757
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123111500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123111500
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123111500
mRNA cycle factors
Common to processing body (P body) and stress granule
123111500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_11
Motif
Other DBs
NCBI-GeneID:
123111500
NCBI-ProteinID:
XP_044388237
LinkDB
All DBs
Position
5B:298258090..298265300
Genome browser
AA seq
1031 aa
AA seq
DB search
MMTVPMDSTAVPPSRDLVQRLLKKNAELKSHLEKSAQSKVPSDPNIWLQMRENFEKMILA
DHDFCEKHEIEYILWQLHYKRIEEFRHHISSAGSAASQNGKNNANPDRIKRIKSAFRSFL
SEASGFYHDLMFKIKSNYDLPLGYFSESPENASNPGKNDKRTADAKKALISCHRCLIYLG
DLARYKGMFGDADSVRREYNAASNYYKEAASICPSSGNAHHQLAILASYSGNEVVAVYRY
FRSLAADTPFSTARDNLILAFEKNRQGYAQLPSNNKVAIARTLPPRSAGRGRGRGEIRFQ
PKDVNTEAASKEREQSIPDTLKSFFVRFVRLNGILFTRTSLETFEELFDVVINDLKILLS
SGPNEEFHFGSDAAENALVIVRLVAILIFTVHNVKKEPDNQSYAEIVQRRVLLQNAFTAA
FEFVGHILKRCSELRDIASSFYLPAIVVYIEWLACHPELAADSEMDEKHANARSFFWNQC
VLLMNKLILTDLASIDGDDDEACFFDMGVYEEGETGNRLALWEDFELRGFSPLVPAHIIL
DFSSKHTFGSDGSTKEKKARAQRILSAGKALLNFVQIDQLRIYFDPSSRKFVVAKEPPVF
EAATSTHRSRNAPETNAVELEHEVGNKFDAVATNLGAMQSGAQLCSEGEDDEEIVFKPTA
SEKLPKVLTELPVNGYIQPLQMSTAGWPTIGGPVAIQSTASASGPGNCNVNESLPMSSGG
WAFNGRREAISSNVSMSTTYEFVQPVEMATSSWASNGAPLVGPLNTMPTFSAAISDPRVS
AAMVPHFGSPDYSKLLLEQEKLLMMGLNNVHLAGNGFPEQRFQGGPSGLQSMVYSPHVSV
ESAGNNTSLMHNQVKATEETIPSTSDSIVPSVAASGGMTINLTDAPVAVSKKNPVSRPSR
PVGPPPGFNHITPKRHDDIMPFEKLQHQQIDDYSWLDGYQPSLERVHNSKAIYPDVATTS
SAFTTPFPFPGKQQVSGVYTLGASEKTWQDFHLFDPAKQNMVQNHQQINQHSGQVAEKQP
AKPIGSGRYLV
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgttccgatggatagtactgctgttccgccatcgcgggacctcgtgcagcgc
ctccttaagaagaatgccgaactcaaaagtcatcttgagaagtcagcacagtccaaagtc
ccatcagatcccaacatatggcttcagatgcgtgagaattttgagaaaatgattctggca
gatcatgacttctgtgaaaagcatgagatcgagtatattttgtggcagttgcactacaaa
agaatcgaggagttcaggcaccacattagttctgcaggttcagctgcatctcagaatggg
aagaacaatgccaaccctgatcgaattaagagaattaagtcggccttcaggagcttcctt
tcagaagcatcgggcttctatcatgacttgatgttcaagatcaaatccaactacgacctt
cctctgggttacttctcggagtctcctgagaatgcaagcaaccctggcaaaaatgataag
agaacagctgatgctaagaaagccctgatatcatgccaccgttgtctcatatatcttggt
gatttggcccgctataagggtatgtttggtgatgctgattctgtaagacgtgaatataat
gcggcttctaattactacaaggaggcagcttcaatctgcccttccagcggcaacgcacac
catcagcttgcaatattagcttcttactctggcaatgaggtggtggctgtctacagatac
tttcgaagcttagctgcagacactcccttctccacagcacgggacaacttgattcttgct
tttgagaagaatcgccagggctatgcacagctgccaagcaacaacaaagttgcaattgct
aggacattacccccacggtcagctggtaggggcagaggacggggcgaaataaggtttcag
cccaaggatgttaatactgaagcagcttcaaaagagcgagagcaaagtattcctgataca
ctgaagtccttctttgtacggtttgttaggctcaatggaattcttttcacaaggactagt
ttggaaacatttgaggaactgtttgatgtggtcatcaacgatctgaaaattctcctctct
tctggtccaaatgaagagttccattttggttctgatgctgcagagaacgcattagttatt
gttcgacttgttgcaatccttatattcacagtgcacaacgtgaaaaaggaaccagataac
cagtcatatgctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgct
tttgagtttgttggacatattctcaaaaggtgctcagaacttcgtgatattgcatcaagt
ttctatcttccagccattgtggtctacatcgaatggctggcatgccatccggagttagct
gctgattcggagatggacgagaagcatgcgaatgctcgatctttcttctggaaccagtgt
gtcttgcttatgaataagctcatccttacagaccttgcgtccattgatggtgatgatgat
gaggcttgcttttttgatatgggcgtgtatgaagagggtgaaactggcaatcgacttgca
ttgtgggaagattttgaattaaggggattttcccccttggtgcctgcacatattatcttg
gatttctcaagcaagcacacatttggaagtgatggtagcaccaaggagaagaaagcacgg
gcacaacggatactttctgcagggaaggctctactcaattttgttcagattgatcaactg
agaatatattttgacccatcttcaagaaagtttgttgtggccaaggagcctcctgttttt
gaagctgccacctctactcatagatctcgcaatgcacctgaaacaaatgctgttgagctg
gaacatgaagttggtaacaaatttgatgcagtggcaactaatcttggagcaatgcagtcg
ggagcacagttgtgttccgagggagaagatgatgaagaaattgttttcaaacctacagcg
tctgagaagctcccaaaagtacttaccgaactacccgttaatggatatatccagcctcta
caaatgtctactgctgggtggccaacaattggcggaccagttgctattcagagtactgca
tctgcatcaggtcctggaaactgtaatgttaacgagtcacttcccatgtcttctggtggt
tgggctttcaatggcaggcgagaggctatttctagcaatgtttcaatgtcgacaacttac
gaatttgtgcagcctgttgagatggctacttccagctgggcaagtaatggtgcaccactt
gttggccctctgaacacaatgcctactttctcagctgccatctctgacccgcgtgtatct
gcagcaatggttccacattttggcagcccagattattcaaaattgctccttgaacaagaa
aaactcttaatgatgggattaaataatgttcatttggctggaaatggatttcctgagcag
aggtttcagggtgggccgagtggattacagtcaatggtatattctccacatgtatctgtt
gaatctgcgggcaacaatacaagtttgatgcataatcaggtgaaagcgactgaagaaacc
atcccatccacttctgattcaattgtaccatcagtagcagcatctggtgggatgacaatc
aatctcactgacgcacctgtagctgtatcaaagaagaatcctgtgagtcgtccatcaagg
cccgttggtcctcctccaggatttaatcacatcactccaaaacgccatgatgatattatg
ccatttgagaagctgcagcaccaacagatcgatgattacagctggctggatggctaccag
ccatcactggaacgtgttcataactcaaaagctatttatcctgatgttgccactaccagc
agtgcattcaccactcccttccctttccctgggaaacagcaggtttctggggtgtacacc
ttaggggccagtgagaaaacatggcaagatttccacctttttgaccctgcaaagcagaat
atggttcaaaaccaccaacaaattaatcagcatagtggtcaagtggctgaaaagcagccg
gcaaaacctatcggatctggccgttatcttgtgtga
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