KEGG   Triticum aestivum (bread wheat): 123111553
Entry
123111553         CDS       T07757                                 
Name
(RefSeq) protein RDM16-like isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123111553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:taes03041]
    123111553
Spliceosome [BR:taes03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    123111553
SSDB
Motif
Pfam: PRP3 Prp3_C SabA_adhesion
Other DBs
NCBI-GeneID: 123111553
NCBI-ProteinID: XP_044388292
UniProt: A0A3B6LIZ5
LinkDB
Position
5B:complement(308136535..308140124)
AA seq 823 aa
MDRDRSSRRDRDRGEDRHTTHERSDDHHGRRRHDSDGHQHHHKRDAEDDHRRRRHDDGGV
EEDRRRARRHRSYSPSEPPPTAKRDRSSSRAPRDSVERRDSADREQLPPPSRKRKDHDSG
RRDGDEPDREGGKRPRASVEPPPRKEERPRRERRRFEDVDAYGDERGKGDKGSLSREHRK
VESGANGDSQSGAATNGGAQQPLNSAPAVAVPSANPVSSKVSSITTTNENGGVSIRSDEV
TGKSSTDGTANSSAGRSSNLSLDALAKAKKALQLKKELSEKLKRLPALNKLGTTIPDTQT
PKKETQSVSGSSASAVHAGASSELPASSVSAGISGLTNIPNLDAVKRAQELAAKMGFRQD
PQFAPLINMFPGTSSELTVPQRPAKAPVLRLDAQGREIDENGNVISMTKPSNLSTLKVNI
NKQKKDAFQIIKPDLESLAKATVHFDERMGINPTKLLRPKRPGFQFIEEGKLSRQAELQR
IKNQFGEAQAKELKVKQAQLAKAKVEVDMNPNLIEIAPGGRPPKQKQKEEIPDIEPWDSK
ILVSPTYEDISLEKLNMDKITIYVEHPEPLEPPAEPAPPPPQPLKLTKKEQKKLRTQRRL
AKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGAEATQDPTRMEMEIRTAAAEREQAHVDR
NIARKLTPSERREKKERKLFDDPNTLGCIVCVYRIRDLSHPQTRFKVDVNAQENRLTGTA
VITDGISVVVVEGGRKSIKRYNKLMLNRIDWAAAVGGEDDADEEPDRPVNSCVLVWQGSV
VKPTFPRFGVHQCRSEAAAKKVFADAKVPHYWDLAVNFSEDSS
NT seq 2472 nt   +upstreamnt  +downstreamnt
atggatcgcgaccgatcttctcgccgcgaccgcgaccgcggtgaggaccgccacaccacc
cacgagcgctcggatgaccaccacggacgccgccgccacgacagcgacggccatcagcac
caccacaagcgggacgccgaagacgaccaccgccgtcgtcgccacgacgacggtggtgtc
gaggaagaccgccgccgtgctcgccgacaccgttcgtattccccctccgagcccccaccg
accgcgaagcgggatcggtcgtcgagccgcgccccccgggattccgtcgagcgccgcgat
tcggccgaccgcgagcagctgccgccgccgtcacggaaacggaaggaccacgacagcggc
cgccgcgacggcgacgagcccgaccgtgaaggcgggaagcggccgagggcctcagtggag
cctcctccgaggaaggaggaaaggccaaggcgagagcgcaggaggtttgaggacgttgat
gcgtatggtgatgagaggggtaagggggacaagggcagtttgtctcgtgagcacaggaag
gtagagtctggtgctaatggagattcacagagcggcgcagccactaatggtggcgctcag
cagccgctcaattctgcacctgctgttgcggtgccatctgctaatcctgtttcttcaaag
gtatcttcgattaccaccaccaatgaaaatgggggagttagtattagatctgatgaagtt
actggaaaatctagtacagatggaactgcaaattcatccgctggcagaagtagtaactta
agtcttgatgctttagcaaaagctaaaaaagctttgcaactgaagaaggaattatcagaa
aaactcaagagattacctgcgcttaataaacttggcactactattcctgatacacaaact
cctaagaaagaaacacagtctgtttctggctcgagtgcatctgcagtccatgcgggtgca
tcttctgaactgcctgcaagtagtgtctctgccggcatttcagggcttaccaacattccc
aatttggatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggat
ccacagtttgcacctcttatcaacatgttccctggtacatccagtgaactgactgttcct
caaagacctgccaaggctcctgttctccgtcttgatgctcaaggtagggaaattgatgag
aatggaaatgttatcagcatgaccaagccaagcaacctgagtactctaaaggtcaacatt
aacaagcagaagaaggatgcattccagattatcaaaccagacttggagtcgcttgcaaaa
gctactgttcattttgatgaaaggatgggcatcaacccaactaagctccttcgtcctaaa
aggccaggattccagtttattgaggaaggcaaactttcgaggcaggctgaattgcagagg
atcaagaatcaatttggcgaagcacaagccaaagagcttaaagtaaagcaagctcaactt
gctaaggcaaaggtcgaggtagacatgaacccaaacctaattgaaattgctcctggtgga
aggcctccaaagcaaaagcagaaggaagagattcctgacattgagccatgggactcaaag
attttggtatctcctacgtatgaggacatctccttggaaaagcttaatatggataagatc
accatctatgtggaacatccagaaccattggaaccaccagctgagcctgcaccaccaccg
cctcagccacttaagctgactaagaaggagcagaagaagctcagaacacagaggcgcctc
gctaaggaaaaagataggcaagaaatgattaggcaaggcctcttggagccaccaaagccc
aaggtcaagatgagcaaccttatgaaagtacttggtgcagaagctacacaggatcccaca
cgtatggagatggaaatccgaactgctgctgcagagcgtgagcaggctcacgtggaccgc
aacattgcccgcaaactcacgccatcagaacgccgtgagaagaaggagaggaagctgttt
gatgatcccaacacactaggctgtattgtttgtgtgtacagaatcagagacctgtcgcac
ccccagacccgcttcaaagttgacgtgaatgcccaagagaaccggctgactggtacggcg
gttatcacagatggtataagtgttgtggttgtggaaggagggaggaagtcgatcaagagg
tacaataagctgatgctgaaccggattgactgggctgctgcagttggtggcgaggatgac
gccgatgaggaaccagacaggccggtgaatagctgcgtgttagtctggcagggtagcgtg
gtgaagcccacctttcccaggttcggtgtgcatcagtgtcggagtgaggctgctgccaag
aaggtgtttgcagatgctaaagttccacattactgggacctggctgtcaacttttcggaa
gattcgtcttga

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