Triticum aestivum (bread wheat): 123111553
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Entry
123111553 CDS
T07757
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123111553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123111553
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123111553
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
123111553
NCBI-ProteinID:
XP_044388292
UniProt:
A0A3B6LIZ5
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Position
5B:complement(308136535..308140124)
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AA seq
823 aa
AA seq
DB search
MDRDRSSRRDRDRGEDRHTTHERSDDHHGRRRHDSDGHQHHHKRDAEDDHRRRRHDDGGV
EEDRRRARRHRSYSPSEPPPTAKRDRSSSRAPRDSVERRDSADREQLPPPSRKRKDHDSG
RRDGDEPDREGGKRPRASVEPPPRKEERPRRERRRFEDVDAYGDERGKGDKGSLSREHRK
VESGANGDSQSGAATNGGAQQPLNSAPAVAVPSANPVSSKVSSITTTNENGGVSIRSDEV
TGKSSTDGTANSSAGRSSNLSLDALAKAKKALQLKKELSEKLKRLPALNKLGTTIPDTQT
PKKETQSVSGSSASAVHAGASSELPASSVSAGISGLTNIPNLDAVKRAQELAAKMGFRQD
PQFAPLINMFPGTSSELTVPQRPAKAPVLRLDAQGREIDENGNVISMTKPSNLSTLKVNI
NKQKKDAFQIIKPDLESLAKATVHFDERMGINPTKLLRPKRPGFQFIEEGKLSRQAELQR
IKNQFGEAQAKELKVKQAQLAKAKVEVDMNPNLIEIAPGGRPPKQKQKEEIPDIEPWDSK
ILVSPTYEDISLEKLNMDKITIYVEHPEPLEPPAEPAPPPPQPLKLTKKEQKKLRTQRRL
AKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGAEATQDPTRMEMEIRTAAAEREQAHVDR
NIARKLTPSERREKKERKLFDDPNTLGCIVCVYRIRDLSHPQTRFKVDVNAQENRLTGTA
VITDGISVVVVEGGRKSIKRYNKLMLNRIDWAAAVGGEDDADEEPDRPVNSCVLVWQGSV
VKPTFPRFGVHQCRSEAAAKKVFADAKVPHYWDLAVNFSEDSS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgaccgatcttctcgccgcgaccgcgaccgcggtgaggaccgccacaccacc
cacgagcgctcggatgaccaccacggacgccgccgccacgacagcgacggccatcagcac
caccacaagcgggacgccgaagacgaccaccgccgtcgtcgccacgacgacggtggtgtc
gaggaagaccgccgccgtgctcgccgacaccgttcgtattccccctccgagcccccaccg
accgcgaagcgggatcggtcgtcgagccgcgccccccgggattccgtcgagcgccgcgat
tcggccgaccgcgagcagctgccgccgccgtcacggaaacggaaggaccacgacagcggc
cgccgcgacggcgacgagcccgaccgtgaaggcgggaagcggccgagggcctcagtggag
cctcctccgaggaaggaggaaaggccaaggcgagagcgcaggaggtttgaggacgttgat
gcgtatggtgatgagaggggtaagggggacaagggcagtttgtctcgtgagcacaggaag
gtagagtctggtgctaatggagattcacagagcggcgcagccactaatggtggcgctcag
cagccgctcaattctgcacctgctgttgcggtgccatctgctaatcctgtttcttcaaag
gtatcttcgattaccaccaccaatgaaaatgggggagttagtattagatctgatgaagtt
actggaaaatctagtacagatggaactgcaaattcatccgctggcagaagtagtaactta
agtcttgatgctttagcaaaagctaaaaaagctttgcaactgaagaaggaattatcagaa
aaactcaagagattacctgcgcttaataaacttggcactactattcctgatacacaaact
cctaagaaagaaacacagtctgtttctggctcgagtgcatctgcagtccatgcgggtgca
tcttctgaactgcctgcaagtagtgtctctgccggcatttcagggcttaccaacattccc
aatttggatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggat
ccacagtttgcacctcttatcaacatgttccctggtacatccagtgaactgactgttcct
caaagacctgccaaggctcctgttctccgtcttgatgctcaaggtagggaaattgatgag
aatggaaatgttatcagcatgaccaagccaagcaacctgagtactctaaaggtcaacatt
aacaagcagaagaaggatgcattccagattatcaaaccagacttggagtcgcttgcaaaa
gctactgttcattttgatgaaaggatgggcatcaacccaactaagctccttcgtcctaaa
aggccaggattccagtttattgaggaaggcaaactttcgaggcaggctgaattgcagagg
atcaagaatcaatttggcgaagcacaagccaaagagcttaaagtaaagcaagctcaactt
gctaaggcaaaggtcgaggtagacatgaacccaaacctaattgaaattgctcctggtgga
aggcctccaaagcaaaagcagaaggaagagattcctgacattgagccatgggactcaaag
attttggtatctcctacgtatgaggacatctccttggaaaagcttaatatggataagatc
accatctatgtggaacatccagaaccattggaaccaccagctgagcctgcaccaccaccg
cctcagccacttaagctgactaagaaggagcagaagaagctcagaacacagaggcgcctc
gctaaggaaaaagataggcaagaaatgattaggcaaggcctcttggagccaccaaagccc
aaggtcaagatgagcaaccttatgaaagtacttggtgcagaagctacacaggatcccaca
cgtatggagatggaaatccgaactgctgctgcagagcgtgagcaggctcacgtggaccgc
aacattgcccgcaaactcacgccatcagaacgccgtgagaagaaggagaggaagctgttt
gatgatcccaacacactaggctgtattgtttgtgtgtacagaatcagagacctgtcgcac
ccccagacccgcttcaaagttgacgtgaatgcccaagagaaccggctgactggtacggcg
gttatcacagatggtataagtgttgtggttgtggaaggagggaggaagtcgatcaagagg
tacaataagctgatgctgaaccggattgactgggctgctgcagttggtggcgaggatgac
gccgatgaggaaccagacaggccggtgaatagctgcgtgttagtctggcagggtagcgtg
gtgaagcccacctttcccaggttcggtgtgcatcagtgtcggagtgaggctgctgccaag
aaggtgtttgcagatgctaaagttccacattactgggacctggctgtcaacttttcggaa
gattcgtcttga
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