Triticum aestivum (bread wheat): 123111793
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Entry
123111793 CDS
T07757
Name
(RefSeq) THO complex subunit 6-like
KO
K13175
THO complex subunit 6
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123111793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123111793
03041 Spliceosome [BR:
taes03041
]
123111793
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123111793
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123111793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_SPT8
Ge1_WD40
v110
Motif
Other DBs
NCBI-GeneID:
123111793
NCBI-ProteinID:
XP_044388612
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Position
5B:complement(347492695..347499469)
Genome browser
AA seq
386 aa
AA seq
DB search
MAAATATATVQAQPGLDAREWDEAAYRRGILRERDLSCRTLFRAVFYDQRDEPDPDVLLA
AASSDGSLASFSLSSCIASSASAHAAPQLAAAALVDPVCIVQAHSGPVYDAKFYNDPIQP
LLFSCGDDGHIRGWRWHEMQSCLLPLSLQGDHVEPILDLVNPQHEGPWGARSPIPENNAI
AISKQDGSLFAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANHQVVTGSEDGTA
RIWDCRSGKCTQTIRPVQNKKFEGSWVGCIAIDASESWLACGTSCGISVWSLLSNECIFN
ADCGAPVQDLLFDKNQILAVGAEPALSRFTINGVVVSQIKCAPPSAFSVSMHSSGMAAVA
GHGGLVDVISGFGSHLCAFRCRGLDR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgacggcgacggcgacggtgcaagcgcagccaggactcgacgcgcgcgag
tgggacgaggcggcgtaccggcggggcatcctgcgggagcgcgacctctcctgccgcacc
ctcttccgcgccgtcttctacgaccagcgcgacgaacccgacccggacgtcctcctcgcc
gccgcctccagcgacggatccctcgcgtccttctcgctgtcctcctgcatcgcctcctcc
gcctccgcccacgccgccccacagctggctgccgccgcgctggtcgaccccgtctgcatc
gtccaagcgcacagcggccccgtctacgacgccaagttctacaacgatccgattcagccg
ctgctcttcagctgcggggatgacggccacatccggggttggagatggcacgagatgcag
agctgccttctgccactctctctgcaaggggatcatgttgaaccaatacttgacttggtt
aaccctcagcatgaaggcccttggggtgcacggtctccaataccagaaaataatgccatt
gcaattagcaaacaggatggatctcttttcgcggcagcgggtgatgcatgtgcttattgc
tgggatgtggaaagtggaaagtgtaaaatgacctttaaggggcatactgactatttgcat
agtatcgcagttcgtgaggcaaaccaccaggtggtaactggatcagaggatgggacagcc
cgtatctgggattgcagaagtgggaagtgtacgcagacgatacgtccagtacagaacaag
aaatttgagggctcgtgggtcggttgcattgccattgatgcgagtgaaagttggctggct
tgtggtacttcttgtggtatatcagtttggagtcttctttcaaatgagtgcatcttcaac
gcagattgtggtgctcctgttcaagatttgttgtttgacaaaaatcaaattttagcggtt
ggcgctgaacctgcgctctcccgtttcacgatcaacggggttgttgtttcgcaaataaag
tgcgctcctccgtcggcattttccgtctccatgcattcatctgggatggcagctgttgct
gggcatggaggtctggtggatgtcatctctggattcgggagccatctttgcgcgtttcgt
tgccgtggcctggataggtaa
DBGET
integrated database retrieval system