KEGG   Triticum aestivum (bread wheat): 123111793
Entry
123111793         CDS       T07757                                 
Name
(RefSeq) THO complex subunit 6-like
  KO
K13175  THO complex subunit 6
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123111793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taes03019]
    123111793
   03041 Spliceosome [BR:taes03041]
    123111793
Messenger RNA biogenesis [BR:taes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123111793
Spliceosome [BR:taes03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123111793
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_DCAF4 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_SPT8 Ge1_WD40 v110
Other DBs
NCBI-GeneID: 123111793
NCBI-ProteinID: XP_044388612
LinkDB
Position
5B:complement(347492695..347499469)
AA seq 386 aa
MAAATATATVQAQPGLDAREWDEAAYRRGILRERDLSCRTLFRAVFYDQRDEPDPDVLLA
AASSDGSLASFSLSSCIASSASAHAAPQLAAAALVDPVCIVQAHSGPVYDAKFYNDPIQP
LLFSCGDDGHIRGWRWHEMQSCLLPLSLQGDHVEPILDLVNPQHEGPWGARSPIPENNAI
AISKQDGSLFAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANHQVVTGSEDGTA
RIWDCRSGKCTQTIRPVQNKKFEGSWVGCIAIDASESWLACGTSCGISVWSLLSNECIFN
ADCGAPVQDLLFDKNQILAVGAEPALSRFTINGVVVSQIKCAPPSAFSVSMHSSGMAAVA
GHGGLVDVISGFGSHLCAFRCRGLDR
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggcggcggcgacggcgacggcgacggtgcaagcgcagccaggactcgacgcgcgcgag
tgggacgaggcggcgtaccggcggggcatcctgcgggagcgcgacctctcctgccgcacc
ctcttccgcgccgtcttctacgaccagcgcgacgaacccgacccggacgtcctcctcgcc
gccgcctccagcgacggatccctcgcgtccttctcgctgtcctcctgcatcgcctcctcc
gcctccgcccacgccgccccacagctggctgccgccgcgctggtcgaccccgtctgcatc
gtccaagcgcacagcggccccgtctacgacgccaagttctacaacgatccgattcagccg
ctgctcttcagctgcggggatgacggccacatccggggttggagatggcacgagatgcag
agctgccttctgccactctctctgcaaggggatcatgttgaaccaatacttgacttggtt
aaccctcagcatgaaggcccttggggtgcacggtctccaataccagaaaataatgccatt
gcaattagcaaacaggatggatctcttttcgcggcagcgggtgatgcatgtgcttattgc
tgggatgtggaaagtggaaagtgtaaaatgacctttaaggggcatactgactatttgcat
agtatcgcagttcgtgaggcaaaccaccaggtggtaactggatcagaggatgggacagcc
cgtatctgggattgcagaagtgggaagtgtacgcagacgatacgtccagtacagaacaag
aaatttgagggctcgtgggtcggttgcattgccattgatgcgagtgaaagttggctggct
tgtggtacttcttgtggtatatcagtttggagtcttctttcaaatgagtgcatcttcaac
gcagattgtggtgctcctgttcaagatttgttgtttgacaaaaatcaaattttagcggtt
ggcgctgaacctgcgctctcccgtttcacgatcaacggggttgttgtttcgcaaataaag
tgcgctcctccgtcggcattttccgtctccatgcattcatctgggatggcagctgttgct
gggcatggaggtctggtggatgtcatctctggattcgggagccatctttgcgcgtttcgt
tgccgtggcctggataggtaa

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