Triticum aestivum (bread wheat): 123112804
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Entry
123112804 CDS
T07757
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123112804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123112804
03036 Chromosome and associated proteins [BR:
taes03036
]
123112804
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123112804
Coactivators
SAGA/TFTC/STAGA complex
123112804
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123112804
STAGA complex
123112804
TFTC complex
123112804
SAGA complex
123112804
SLIK complex
123112804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Cytochrom_D1
RecX_HTH3
Beta-prop_VPS8
WD40_like
PALB2_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
123112804
NCBI-ProteinID:
XP_044389833
UniProt:
A0A3B6LQT3
LinkDB
All DBs
Position
5B:complement(505468701..505476375)
Genome browser
AA seq
656 aa
AA seq
DB search
MEDEEMERKVQQYLHRKGFRLTELALQEERNRLSTTSLSDVSLSRPDNDPARYYDGYNKL
RSWAYNSLDQYKHELLRVLYPAFIHCFMDLVSEGHTLEARAFFLKFREDHELMHSRDLQK
LEGTLSPLHLEEMDLARSLRENKFRIKLCEYSYELLLQYLQKTQALVMLGIINERIIFEV
SAGQPSLISDDADVVALVGTSKDLAKQINQKEVHWGLLEDSVEERMEKALLDSDRAEAES
KDADAEDNNKKKSSEGGKQGGPLNKKLKKDKLVGATGKNTKSETSMISAAPRVKPELTLP
ATPVEVEQSILEDLRNRAQLNNLALPSVSFYTFLNTHNGLNCSSISNDGSLVVGGFSDSS
VKVWDMAKIGQPAKTSSSQGENGSSQDERLSSTSEGKRPYTLFQGHSGPVYSAAFSPFGD
FLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDR
IQPLRIMAGHLADVDCVHWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIGHRSMVLSLA
MSPDGRYMASGDEDGTIMMWDLSTGRCVSPLAGHNSCVWSLAFSCEGALLASGSADCTVK
LWDVASSTKALKMDDTKAGSTNRLRLLKALPTKSTPVYNLRFSWRNLLFASGALSL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggagatggagaggaaggtgcagcagtacctgcaccgcaagggcttccgc
ctcaccgagctcgcgctgcaggaggagcgcaaccgcctctccaccacctccctctccgac
gtctcgctctccaggccggataacgacccagcaagatactatgatggctacaacaagcta
agatcatgggcatacaattctctggaccaatacaagcatgaattactccgtgtcctttat
ccagcgtttatccattgcttcatggatctagtgtcagaggggcatacactagaagctcgg
gcatttttccttaaatttcgggaagatcatgaactgatgcattcaagggatctccaaaag
ctggaaggcactctttctcctttgcatttggaggaaatggatctggcacgatctttaagg
gaaaataaattcagaattaaattatgtgagtattcatatgaattacttctccagtatctc
cagaaaacacaagctcttgtgatgcttggaataatcaatgaaaggataatttttgaagtg
tccgctgggcagccttcattgatctctgatgatgcggatgttgttgctctggttggaacc
agcaaagacttggcaaaacagataaatcagaaggaagtgcattgggggttgcttgaagat
tcagttgaggagcgtatggagaaagcactcttagattctgatagagctgaagcagaaagc
aaggatgcagatgcagaagataataacaagaaaaaatcctcagaaggtggaaagcagggt
ggacctctgaacaaaaagctcaaaaaggataagcttgtaggtgcaacagggaaaaatacc
aaatccgaaacaagcatgatttctgcggctcctcgtgtgaaaccggagctaacccttcca
gcgacgcctgttgaagttgaacaatcaattcttgaggacctgcgaaaccgtgcacaattg
aataacttggcattgccatctgttagcttctacacattccttaatacacataacggatta
aactgctcatcgatctcaaacgatggatctttggttgttggtgggttctcagactcgtca
gtaaaggtttgggatatggcaaagattggtcaaccagcaaaaacatctagttcacaagga
gagaatggatcttcacaggacgagcgcttgtcatcaacatctgaggggaaaagaccgtat
acattattccaaggtcattctggaccagtttattccgctgcctttagtccatttggagat
tttctcctgtcatcatcttcagattcaacaattcggctgtggagtaccaagctgaatgcc
aatcttgtttgttacaaaggacacaattacccagtttgggatgtccaatttagtccagtt
ggccattattttgccagtgcctcgcatgacaggactgctcgaatctggtcaatggataga
atccaacctttgcggataatggctgggcatcttgctgatgttgattgtgtgcactggcat
gtaaattgtaactacattgccaccggctctagtgacaaaactgtaaggctatgggatgtt
caaactggtgaatgtatacgaatgttcattggtcataggagtatggtcttatcactggca
atgtctcctgatgggcgatacatggcctccggagacgaagatgggaccatcatgatgtgg
gatctctctactggtcgctgcgtttcaccactagcgggacacaactcttgtgtgtggtca
cttgctttcagctgcgagggagcattgcttgcatctggatcggctgattgcactgttaaa
ctctgggatgttgcgtccagcacaaaggccctgaagatggatgacaccaaggctggttct
acgaaccgactgaggctgctgaaagctctccctacaaaatcgactcctgtttataacttg
cggttttcttggaggaatcttttgtttgcatctggcgctctctcgctatag
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