Triticum aestivum (bread wheat): 123113056
Help
Entry
123113056 CDS
T07757
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123113056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123113056
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123113056
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123113056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
CHASE5
Motif
Other DBs
NCBI-GeneID:
123113056
NCBI-ProteinID:
XP_044390106
LinkDB
All DBs
Position
5B:542154009..542157802
Genome browser
AA seq
200 aa
AA seq
DB search
MAATAMEHDGGAEVVVTPGELLGPSSSLEAGRGAYADGRSVRASVTGRRRFVAPAPGSSD
QRSTVEVVGHKAHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDV
RATEIDKVDMYQSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTSW
TEMQCELTGQIEQRKVAKVE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggcgatggagcacgatggcggcgccgaggtggtggtcaccccgggggag
ctcctcgggccctcctcgtctctcgaggccgggcgcggcgcttacgccgacggccgctcc
gtgcgcgcgtcggtcaccggccgccgccgcttcgtggcccccgcccccggctcctccgac
cagaggtccacggtggaggtggtcgggcacaaggcgcacggggccgtgccgcagccgggg
agcatcgtcattgcccgtgtgacaaaggttatggctaggatggcgtctgcagatataatg
tgtgttgactcaaaggctgtcaaggaaaagttcactggcatgataaggcagcaagatgtt
cgtgcaactgagatcgacaaggtggatatgtaccagtcatatcgacctggcgatattgtt
agagctctggttctctctcttggtgatgcaagggcatactacctttcgactgccaagaat
gaacttggagttgtttctgcccaaagtatagctggtggcacgctggtcccaaccagttgg
actgagatgcaatgtgaattgactggccaaatcgagcaaagaaaagttgcaaaagtggag
tag
DBGET
integrated database retrieval system
