Triticum aestivum (bread wheat): 123113071
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Entry
123113071 CDS
T07757
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123113071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123113071
03019 Messenger RNA biogenesis [BR:
taes03019
]
123113071
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123113071
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123113071
U7-dependent histone pre-mRNA processing factors
123113071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DUF1815
DUF3213
Motif
Other DBs
NCBI-GeneID:
123113071
NCBI-ProteinID:
XP_044390130
UniProt:
A0A3B6LS70
LinkDB
All DBs
Position
5B:complement(543858743..543862011)
Genome browser
AA seq
693 aa
AA seq
DB search
MTSVATAPPAGKRPAAGGREGDHMVVTPLGAGGEVGRSCVHMSFKGRTVLFDCGIHPAYS
GMAALPYFDEIDPSAIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLS
DYVKVSKVSVEDMLFDEQDIIRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGSAMFMVD
IAGVRILYTGDYSREEDRHLKAAEVPQFSPDICIIESTYGVQQHQPRHVREKRFTDAIHN
TVSQGGRVLIPAYALGRAQELLLILDEYWSNHPELHKIPIYYASPLAKKCMAVYQTYINS
MNERIRNQFAQSNPFHFKHIEPLNSIDNFHDVGPSVVMASPGSLQSGLSRQLFDKWCTDK
KNTCVIPGFAVEGSLVKAIISEPREVTLANGLTAPLHMQIFYISFSAHADFLQTSGFLDE
LRPPNIILVHGEANEMGRLKQKLITQFDGTNTKIVSPKNCQSVEMYFSSEKMAKIVGRLA
EKVPEAEESVSGLLVKKGFTYQIMAPEDLRVYTQLSTTNITQRISVPYSGSFEVIKYRLK
QIYESVESSTEEPDVPTLIVHERVTIRLESESYVTLQWSSDSISDMVSDSVVATILNIGR
EGPKAVPIEAAAKTEEETEKVAQKVVYALMVSLFGDVKVAEEGKLVISVDGDIAHLDGRS
GDVECENAALKERISTAFRRIQGAVRPIPLSAS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgtggcgacggcgccgccggcggggaagcggccggcggcgggcgggcgggag
ggcgaccatatggtggtcacgccgctgggcgccggcggcgaggtcggccgctcctgcgtc
cacatgtccttcaagggccgcaccgtcctcttcgactgcggcatccacccggcctactcc
ggcatggcggcgctgccctacttcgacgagatcgacccctccgccatcgacgtcctcctc
gtcactcacttccacttggaccacgccgcctcgctgccctacttcctcgagaagacgacg
ttcaagggccgcgtgttcatgacccacgccaccaaggccatctacaggctgctgctctcg
gattacgtcaaggtcagcaaggtgtcggtggaggacatgctgtttgacgagcaggacatc
atccgttccatggacaagatcgaggtcatagacttccaccagacactggaagttaatggc
atacgcttctggtgctataccgctggccatgtacttggttctgccatgttcatggtggat
attgccggtgttcgcattctttacactggtgactactcccgtgaagaagaccggcacctg
aaagctgctgaggtcccccagttctcccctgatatttgcattatcgagtcaacttatggc
gtgcagcaacaccaaccccgccatgtcagagaaaagcgcttcacggatgccatccacaac
acggtttctcaaggggggcgtgttcttatcccggcatatgctcttggtagagcacaggaa
ctgttgcttatcctggatgagtattggtctaaccacccagagctccataagattccaatc
tattacgcctcccctcttgcgaagaagtgcatggctgtctaccagacatacataaactcc
atgaacgaaaggatcaggaaccagtttgcacaatccaatcccttccatttcaagcatatt
gagcctttgaatagcatagacaacttccatgatgtgggtccgtcagtggtgatggcaagt
ccaggtagtctccaaagtggcctctccaggcagctctttgacaagtggtgcacagataag
aagaacacatgtgttattccaggttttgccgtagaaggctcccttgtgaaggccattatc
agcgagccgagagaagtgacgttagcgaatgggctcactgctccccttcatatgcagatc
ttctacatctccttttccgctcacgctgatttcctacagacgagcggtttcttggatgag
cttcgcccacccaacattattcttgtacacggagaggcaaatgagatggggaggcttaaa
cagaaacttattactcagtttgatggaacaaacacaaaaatcgtctctcccaagaactgc
caatcagtggagatgtatttcagctctgagaaaatggcgaagatagttggcagactggca
gaaaaggtaccagaagcggaagaatcagttagtggcttactcgtgaagaagggcttcacg
tatcagatcatggcccctgaggatctccgtgtgtacacacagttatctactactaacatt
actcagcggatctccgtcccatattctggttcttttgaagtcatcaagtacaggctaaag
cagatatacgagagtgtggaatcatcaaccgaggaacctgatgttccaacgctgattgtt
cacgagagggtgaccattcgcctggaatcagaaagctatgttacactgcagtggtcctct
gattccataagcgacatggtgtccgattctgtggtggccacgatcttgaacataggccgt
gaaggcccaaaggctgttccgatcgaagcagcagcaaagacagaagaggaaacggagaag
gtggcgcagaaggtagtatatgctctcatggtgtcgcttttcggtgatgtcaaagtcgca
gaggaagggaagcttgttatatcggtggacggagacatcgcgcatttggatgggaggagt
ggtgatgtcgagtgtgaaaatgctgcactgaaagaaaggatcagcactgcattccgccgc
atacagggtgcggtgagaccaatcccactctcggcatcctga
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