Triticum aestivum (bread wheat): 123113217
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Entry
123113217 CDS
T07757
Name
(RefSeq) histone-binding protein MSI1 homolog
KO
K10752
histone-binding protein RBBP4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03082
ATP-dependent chromatin remodeling
taes03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123113217
03083 Polycomb repressive complex
123113217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123113217
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
123113217
Histone modification proteins
HAT complexes
HATB complex
123113217
HDAC complexes
Sin3A-HDAC complex
123113217
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123113217
PRC2.2
123113217
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
123113217
Heterochromatin formation proteins
Other heterochromatin formation proteins
123113217
Chromatin remodeling factors
NuRD complex
123113217
NuRF complex
123113217
NuRF complex (fruit fly)
123113217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_RFWD3
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD_LRWD1
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
MIOS_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
123113217
NCBI-ProteinID:
XP_044390338
UniProt:
A0A3B6LSR1
LinkDB
All DBs
Position
5B:560238133..560245674
Genome browser
AA seq
428 aa
AA seq
DB search
MPKAGGGDEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEP
AGKDHSVQKMVLGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHADIGGFGAASGKV
QIVQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKG
HNSEGYGLSWSIFKEGHLLSGSDDAQICLWDITANGKNKTLDAYQIFKFHDGVVEDVAWH
LRHEYLFGSVGDDHHLLIWDMRTPAPTKPVQSVVAHQGEVNCLAFNPFNEWVVATGSTDK
TVKLFDLRKIDTSLHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDQEQTP
EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVLASVAEDNILQIWQMAENIYHDEDDLP
SDEPAKAS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggccggcggcggggacgaggaggagttccgcgccgaggtggaggagcggctg
atcaacgaggagtacaagatctggaagaagaacacgcccttcctctacgacctcgtcatc
acccacgcgctcgaatggccctcgctcaccgtgcagtggctccccgaccgcaccgagccc
gccggcaaggaccactccgtgcagaagatggtgctcggcacccacacctccgacaacgag
cccaactacctcatgctcgcccaggtccagctcccgctcgacgacgccgaggccgacgcg
cgccactacgatgacgaccacgccgacatcggcggcttcggggccgcatccggcaaggtg
caaatagttcaacagataaatcatgatggagaagttaatcgggctcgatatatgccccaa
aattcatttattattgctaccaagacagtcagtgcagaagtgtatgtctttgattatagc
aagcacccatcaaagcctccactagatggtgcgtgcaatcctgatttacggctgaaggga
cacaactctgaaggatatggcctgtcctggagtatctttaaagagggtcatttgctgagt
ggatcggatgatgctcaaatttgcttatgggacatcacagcaaatggtaaaaataaaact
ctcgacgcataccagatttttaagtttcatgatggcgttgtcgaagatgttgcttggcat
ttgaggcatgaatacttattcggctcagttggtgatgatcatcatctcctaatttgggat
atgcgtactcctgcacctaccaagcctgtacagtctgtggtggcacaccagggcgaggtg
aattgcctggctttcaatcctttcaatgaatgggttgttgcaactggttcaaccgacaag
actgtcaaattatttgatcttcggaagattgatacttcgctgcacacttttgactgtcac
aaagaggaagtatttcaagttggatggagcccaaagaatgaaactatacttgcatcttgt
tgcctgggaaggagactgatggtttgggatctaagcagaattgatcaggagcaaacaccg
gaggatgcggaggacggccctcctgagctcttgttcattcatggaggccacacaagcaaa
atctcagacttctcctggaacccatgtgaggactgggtgcttgcaagcgttgctgaagac
aacatccttcagatatggcagatggcggagaacatctaccatgatgaggatgatcttccc
agcgatgagccggcaaaggcctcatga
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