Triticum aestivum (bread wheat): 123119026
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Entry
123119026 CDS
T07757
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123119026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123119026
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
123119026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
123119026
NCBI-ProteinID:
XP_044394603
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All DBs
Position
1B:complement(269316349..269322664)
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AA seq
908 aa
AA seq
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MEADEAPHPPPPWKQNKSAVAVDASSGPLASAAARLSARSRAIPPARDFHFYNNFPSFKS
PVAAAAARAESSLAVLGASMLLPKQQQQPFPTEDLDDAYDWLVARNDDLLEMFAASADEF
KALREKEEAQGRKVAAEEMAGDGFQVVYGKKKKKMGMGEEGVGRSEAFGSSGSVRMATMD
RAAASGPKPKVPFHIPTIPRPQDVHRIVVDNTSKPFDHAFLERSDDGARAIHPLEKLPME
QLFDRRVPESEPLKPPALDDTPFTFVEDRKTLEVLVAKLKSATEFAVDLEHNHYRSFQGL
TCLMQISTRTEDFIVDTLKLRNCLGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVC
NLFDTGQASRILQMDRNSLEHLLQYFCGVTANKEYQSADWRLRPLPDEMTKYAREDTHYL
LYIYDLMRLRLVNESSGDDLLLEVCKRSNEICLQLYEKELLTDSSYLYIHGLKENDLSAR
QLAVLAGLYQWRDGVARAEDESTGYILPNKTLLEIAKQMPVTTGRLKRTVKSKNKFLEHY
LGHVITIIRNAVANADAFESIAEQLKKGRLEELMAAEAKDGSEDTEMIPAVDADSNENNL
QLIAAPDVAPTVITNVHTASFCMGNVTSGASLGNLQLDNITPETKSFGALPGATEQADTV
IPGNGGGQQQVIKATVQVSKRPTAFGALLGKPSTARRPNLFPGFSSDQSKSKVEKIKSSV
VLPFHHFSGGANPPASSLPVAKSVEPEAEIMCEDPASRMEEVIQLDTGTDDPENGNADGQ
SECKPGDTDVCSSPPELSSGIEQRFRSLNESRDLQQKHQALEEPEFNDQLKAFDYAEARK
NTSFGEVRSERRKDNAVARAINADSGDKRKSSKQTPDAGGGEEDEGNFQNPRRRQAFPPS
GNRSDTYH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgaggctcctcacccgccgccgccgtggaagcagaacaagtcggccgtg
gccgtcgacgcctcgtcgggcccgctcgcctccgccgccgcgcgcctgtcagcccgctcc
cgcgcgatccctccggcccgcgacttccatttctacaacaacttcccctccttcaagtcc
cccgtcgccgccgccgccgccagggccgagtcctccctggccgtcctcggcgcctccatg
ctcctccccaagcagcagcagcagcctttccccacggaggacctcgacgacgcctacgac
tggctcgtcgcccgcaatgacgacctgctcgagatgtttgccgcctccgcggacgagttc
aaggcgctgcgggagaaggaggaggcccagggacggaaggtcgcggcagaagagatggcg
ggggacgggttccaggttgtctacggcaagaagaagaagaagatgggtatgggagaggaa
ggagttggcagaagtgaggcctttggatcttctggttcggtgaggatggccaccatggat
agggctgcagcatcagggccaaagccgaaggtgcccttccacatccccaccatcccacgc
ccgcaggacgtgcaccgcattgtggtggacaacacgagcaagccattcgaccatgccttc
cttgagcgcagcgatgatggtgcccgtgccatacacccactggaaaaactccccatggag
caactatttgacaggcgtgttcctgaaagtgagccattaaagccacctgctttagatgac
accccttttacatttgttgaagaccggaaaaccttggaagtgttggtggcaaagctgaag
agtgcaactgagtttgctgttgatttggaacacaaccactataggtcttttcagggtctc
acctgcctgatgcagatttcaactagaactgaggactttattgtagacactcttaagctc
cgcaattgtcttggtgagaacttgagagaagtttttcaagatccaactaagaagaaggta
atgcatggggcaggtcgtgatataatatggcttcaaagggactttggaatatatgtgtgc
aaccttttcgacacagggcaggcttcaagaatcttacaaatggaccgcaacagcctggag
catcttctgcaatatttctgtggagtgacagcaaacaaagaatatcagagtgcagattgg
aggctgaggccacttcctgatgaaatgaccaagtatgctagagaagatacacactatctt
ctctacatatatgacttgatgcgattgcgattggtgaatgagtcttcaggcgatgatctt
cttttggaggtttgcaagcgcagcaatgaaatttgcttgcaactatatgagaaggagctg
ctgactgattcatcatacctttacatacatgggttgaaagaaaatgacttgagtgcaagg
cagctggcagttcttgctggtctatatcaatggagagatggcgtcgctcgtgctgaggat
gagagcactggttatatattacccaataagactctacttgaaatagccaaacagatgcct
gtgaccactgggaggttaaaaagaacagtgaagtcaaaaaataaatttcttgagcactat
ctcggacatgtcattactatcataaggaatgccgtcgcaaatgccgatgcttttgaaagt
atagctgagcaactgaagaaaggaaggctggaagagttaatggcggcagaagcgaaggac
ggcagtgaagacactgaaatgattcctgccgtcgatgctgatagtaatgaaaataatctt
cagctgattgctgcacctgatgtagctcccacagtgattacaaatgtccatactgcttct
ttctgtatggggaatgttacgagcggagcttctttaggtaatttgcaactagataacatc
acacctgaaaccaagagctttggggcgttgccaggcgctactgagcaagcagatacagtg
ataccgggcaatggtggtggtcagcagcaagtaataaaggcaacagttcaagtatcgaag
agacctacggcttttggtgctctgttaggaaaaccctctaccgcaagaaggccaaatcta
tttccaggattttcaagtgaccagagtaaaagcaaggtggagaagatcaagtcttccgtg
gtactgcctttccatcatttctcaggtggtgcaaatcctccagcaagtagccttccagta
gcaaaatcggtggaacctgaagcggaaatcatgtgcgaggatcctgcgtctcggatggag
gaagtgattcagctggacactggaacagatgacccagaaaacggcaacgcagatggacag
agtgagtgcaaacctggagataccgatgtgtgtagctcccctcctgagctttcctctggc
atcgagcagcgcttcagatccctcaacgagagcagagaccttcaacagaagcaccaagca
ctggaagaaccagaatttaatgatcagctgaaggccttcgattacgctgaagctagaaag
aatacttcatttggagaggttagatctgagagaagaaaggacaatgcagttgccagggcc
atcaatgcggattctggagataaacggaaaagttcgaaacaaacccccgatgctggtggc
ggcgaagaggatgaggggaatttccagaatccacgaaggcgacaggctttcccaccttct
ggcaacaggagtgatacgtaccattag
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