Triticum aestivum (bread wheat): 123119635
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Entry
123119635 CDS
T07757
Name
(RefSeq) endoribonuclease Dicer homolog 2a-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123119635
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123119635
microRNA pathway
RISC loading complex
123119635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Dicer_dimer
Helicase_C
PAZ
ResIII
dsrm
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123119635
NCBI-ProteinID:
XP_044395431
LinkDB
All DBs
Position
5D:complement(92224002..92258221)
Genome browser
AA seq
1401 aa
AA seq
DB search
MGDAATAAVAADADAAATEEVHKEDPEIVARWYQLEALERAMSGNTVAFLDTGAGKTLIA
GLLLRAYAHRVRKPARDYAVFLVPTRVLVEQQARVVEAHTDLRVSKFTGDMGVDFWNAAI
WRRVVDDAEVLVMTPQILLDNLRHSFFSLQDIALLIFDECHRAKGNSPYACILKEFYHPV
MNSRPRGPLPRIFGMTASPTDSKNLLQESYSKRIVELENLLNSKVYTVDNESALSEYIPF
ATTRIVQYDDYIIPSNSHNHIKSCLDRLQEKHLEVLKANLHGLSRKNAKKGISKLHKAFL
YCTANLGVWLAAKAAEIHSTTNEQFLSFWGEELDKNVEGFVRSYSEEVYRELSCFSKRGH
IGEDFAADLQDGLLTPKVHCLVQFLLEYRHMQDLRCIVFVERVVTSIVLESLLSTINQMP
GWIVKHIAGNRPMFHNQSRNKQTEIVDAFKGGKVHIIVTTQVLEEGLNVPGCHLVIRFDP
PTTGRSFIQSRGRARMPNSDYVLLVRRGDAEAHSKTLKFLASGQIMREASLKLASTMCQP
LEDTLLQEEYYRVESTGATVTMNSSVQLIYFFCSKLPSDEYFKPLPRFIIDKELRTCTLY
LPNSSPVQAVNTEGEVSALKKAVCLKACRELHAVGALTDYLLPEFGFPCEEEPDIVVEKY
QHEQPEYFPEEFVYNWLYFSRLGIYYCYKISVEGCLKTTYCPNDILLAVKCDLGPDFVST
SLKLFGEQDNASVAMKYVGNIHLNQEQVVMARRFQTSILSLLINKDHSEVINAVKYSHEM
QVSTGIVYLLLPLVCGKVDWCSMKFSTSQVYDASNKDIRHCHSCKQVDLLQTKDGPLCRC
MLQNSIVCTPHNSKFYAVNGFLDLNSKSLLHLRDGRALTYINYFDTRHGLSLTHENQPLL
AARNPVEVRNFLQKRHYKNKKESRTSHGVELPPELCRLVMSPVSNNTLYSFSVIPSVMYR
IQCLLLSARLKDQLGPTMQQFAIPALKILEAVTTKECQEEFSQESLETLGDSFLKYVATQ
HLYGKYKLQHEGTLTKMKKNLISNAALCQLACSNNLVGYIQGEEFNPKGWIIPGLGYDMC
GNSKISFLSSNDMHILRKMSVRSKRIADTVEALIGAYLGAAGEQAAFVFLKSLGLDIEFH
SNIPLERKIVLKSEKFINVRSLEMILGYEFKDTSLLVEALTHGSYQTAGATACYQRLEFL
GDAVLDHLFTIYFYNQYPECTPELLTDLRSASVNNNCYAHAAAKAGLNKHILHSSLQLHG
RMAYYFENFKQPFTGPSHGWEAGIGLPKVLGDVIESLAGAIYLDSKYDKEVVWKSMKQLL
EPLATPETVERDPVKLLQEFCARRSYSSSYTKAHKDGVSSVVVEVQVEGTTYSATETGPD
KIVAKKLAAKSLLNNLKAIVP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgccgccaccgccgccgtcgccgccgacgccgacgccgccgcgacagaggaa
gtacataaggaggatccggagattgtagcgagatggtaccagctggaggcgctggagcgg
gccatgagcgggaacacggtggctttcctggacacgggggccgggaagacgctcatcgcg
gggctgctgctgcgcgcgtacgcgcaccgcgtgcggaagccggcgcgggattacgccgtc
ttcctcgtccccacccgcgtgctcgtggagcagcaggcacgggtcgtcgaggcgcatacc
gacctccgcgtgtccaagttcaccggcgacatgggcgtcgacttctggaacgccgcaatc
tggcgccgcgtggtggacgacgccgaggtgcttgtcatgacgccgcagatcctcctggac
aacctccgccacagcttcttcagtctccaggacatcgccctgctcatcttcgacgagtgc
caccgcgccaagggcaactccccgtatgcgtgcattctcaaggaattctaccaccctgta
atgaattctagaccacggggccctctgccgaggatatttgggatgactgcttcacccaca
gattcaaaaaatctgctgcaagagagctattctaaacgaatcgtcgaactggagaatcta
ttgaattcaaaggtgtacacagttgacaatgaatcggctttatcggaatacataccattt
gccactacgaggattgtgcagtacgatgattatatcatcccatccaactcacataaccat
atcaagagttgtttggacaggttgcaagaaaagcatttagaagtcctcaaggcaaatcta
catggattgtctcggaaaaatgcgaagaaagggatatcaaaattacacaaggcattctta
tattgcacagctaatcttggagtatggctagcagcaaaggctgctgagatacactcaaca
actaatgaacaattcttatctttctggggtgaagaactggataagaatgttgaaggcttt
gttagaagctatagtgaagaagtatacagggaactctcatgtttttcaaagagaggtcat
attggtgaagattttgcagctgatttgcaagatgggttattgacacctaaagttcattgt
cttgttcagtttcttctggaatacaggcacatgcaagacttaagatgcattgtatttgtc
gagagagttgttacaagcattgtattggagtctctcctgtccactatcaatcaaatgcct
gggtggattgttaaacacattgcaggaaacagacctatgttccacaaccagagtagaaat
aaacaaacggaaattgttgacgcctttaaaggaggaaaggtacatataattgtgaccaca
caagtattggaggaggggctgaatgtgccaggttgtcacttagtaattcgctttgatccc
ccaacaactgggcgcagctttatacagtcacgtggtcgagctcggatgccaaactctgac
tatgttttgcttgttagaaggggggatgcagaggcccactctaagacactgaagtttctt
gcaagcgggcaaataatgcgggaagcatctctgaagcttgcatctactatgtgtcaacca
cttgaagacaccttgttgcaggaagaatattaccgtgttgaatccactggagcaactgtg
actatgaactccagtgtccagttgatatattttttctgctcgaagctcccatctgatgaa
tactttaaacctctaccaagattcattattgacaaggaactacgtacttgcaccctgtac
cttcccaatagcagccctgtgcaggctgttaatacagaaggagaagtttctgccctcaaa
aaggcagtttgtcttaaggcctgccgagaattacatgctgtcggcgctctaacagattat
ctgttaccagaatttggttttccatgtgaagaagaacccgacattgttgttgagaaatac
caacacgagcagcctgagtactttccagaggaatttgtgtacaattggttatacttttct
cgtcttggaatatattattgctacaagatttcagtagaagggtgcttgaaaacaacttat
tgtccaaatgatatacttctagctgtgaaatgtgatttgggaccagactttgtctctacc
tcactaaaattgtttggtgagcaagacaatgctagtgttgccatgaaatatgtgggaaac
attcatttgaatcaagaacaggtagttatggcaagaagatttcagactagcattctttct
ttgcttattaataaagaccattctgaggtcattaatgctgtcaaatactcccatgagatg
caagtgtccactggaattgtctatctactgctacccttagtttgtggcaaagttgattgg
tgcagtatgaagttctcgacctcgcaagtatatgatgccagtaacaaggatatcagacat
tgccattcttgtaaacaagttgatttactgcaaacaaaagatggtcctctgtgcagatgc
atgcttcaaaattccattgtttgtacccctcacaatagcaaattctatgctgttaatggg
ttccttgacttaaattccaaatctcttctgcaccttcgtgatggcagagcccttacctac
ataaactatttcgatactaggcatggactcagtctaacacatgaaaatcaacccctgttg
gcagccaggaatcctgttgaagtgcggaatttcctccagaagcgccattataaaaataaa
aaagaatcgcgcacttcacatggtgttgagttgccacccgagctctgcagactagtcatg
tcaccggtgtctaataacactctgtacagcttctcggtcattccttctgtgatgtaccgc
atccagtgtctgcttctttcagcaaggttgaaagatcaactgggcccaacaatgcagcag
tttgccataccagctctgaagattctagaagcagtaacaaccaaggaatgccaagaggag
ttttcacaggaatcattagaaactcttggggattctttcctaaagtacgtcgccacacaa
catttgtatggcaaatacaagcttcagcatgagggaacattaaccaagatgaagaaaaac
ttgatctccaatgcagctctatgccagctagcctgcagcaacaatcttgtgggttacatt
caaggggaagagtttaacccaaaaggttggatcattccagggcttggttacgacatgtgt
ggtaacagcaaaatttcctttttaagctccaatgatatgcacattttgagaaaaatgtct
gttagaagtaagagaatagcagatacagttgaggcgttgattggagcctaccttggtgct
gccggagaacaggctgcatttgttttcctaaaatcattaggattggatatagaatttcac
agcaatattccacttgaaaggaagattgtattaaaatctgaaaagttcatcaacgtgaga
agtttggaaatgattcttggttatgagttcaaggatacctcattgttggtggaagcattg
acacatgggtcataccagactgctggcgctactgcatgctatcagaggcttgagtttctc
ggtgacgctgtgttggaccatctcttcactatatatttctacaatcagtaccctgaatgt
actccagaattgttgacagatcttagatctgcttccgtcaacaacaattgctatgcgcat
gcagctgctaaagcaggactaaacaagcacattcttcattcgtcattacaattgcatgga
aggatggcttactactttgagaattttaagcagccatttacaggtccatcacatggttgg
gaagctggcattggtctacccaaggttcttggggatgttattgaatcattagctggtgcc
atttatcttgacagcaagtatgacaaagaggtggtttggaaaagcatgaaacagctattg
gagcctcttgcgacgccggagacggttgagcgtgacccagtgaaactgctgcaggaattt
tgtgctcgcaggtcttatagcagttcttacacaaaggcccataaagatggagtatcttcg
gtggttgtggaggtacaggtagaaggcactacctactcggcaacagaaactggccctgat
aagattgtcgccaaaaagcttgcagcaaagtcgctgctaaataatctgaaggctattgta
ccatga
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