Triticum aestivum (bread wheat): 123119643
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Entry
123119643 CDS
T07757
Name
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123119643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123119643
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123119643
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123119643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD_DEAH11
KH_DEAH11_2nd
KH_DEAH11
KH_DEAH11_1st
IBR
Helicase_C
OB_NTP_bind
DEAD
IBR_1
Rcat_RNF216
zf-RING_UBOX
AAA_22
AAA_19
KH_SLS1_1
RRM_1
ABC_tran
nSTAND_NTPase5
Arc_MA
gp37_trimer
AAA_30
WHD_HA2
KH_Vigilin
AAA_29
Motif
Other DBs
NCBI-GeneID:
123119643
NCBI-ProteinID:
XP_044395440
UniProt:
A0A3B6MM60
LinkDB
All DBs
Position
5D:93874941..93883276
Genome browser
AA seq
1675 aa
AA seq
DB search
MARSHADRPFRPPDRGPLPPHRSQQHRQPHPQSAAILLLRAGPDFSSPPATEVDALVAGL
RPDSLSVFSSGRHAARLLFRSLPAAAAAARDLWSLRLEGRHLLTPYLPDAALAAKAFPLI
SSLFASHASRLLDSDLVSRLAARSSQLAASVQSVKHRLRVRRSNLRDFDQLNLQRKTLEA
DKDLLDAKIAEYKAAMMSIRRAMLSGTDEEEEGVDLFGIVEGDDVDFARVHTMMLRECRR
LNEGLPIYAYRRKILNHIFANQVMILIGETGSGKSTQLVQYLADSGLAANGSIVCTQPRK
IAAITLARRVDEESNGCYADNFVSSCSTFSGSRGFSSEIIFGTDSYLLHHCMNDTGLDGV
SYIIVDEAHERSLNTDLLLALIKKELLDRVDLRLIIMSATADANRLAEYFYGCQTFHVKG
RNFPVEIKYIPDVSVDASFNTVPNSLNDACATASYVNDVVRVVSVIHKNEEEGAILAFLT
SQLEVEWACENFSDASAVVLPMHGKLSHVEQSRVFNSYPGKRKVIFCTNMAETSLTIKEV
KYVVDPGLAKESRFVPSSGLNVLKVNWISQSSANQRAGRAGRTGAGKCYRLYSESHFRMM
EVHQEPEIRKVHLGTAVLRILALGVRDAQNFEFVDAPNPEAINMALKNLEQLGAVKCKCN
LFELTDTGRYLVKLGIEPRLGKIMLDCFDSGLRKEGVILAAVMANSSSIFCRVGTNEEKH
KADLQKVRLCHQDGDLFTLLAVYKKWEDGNGNRNMWCWQNSINAKTMRKCQETISELENC
LKHELNIIVPSYWCWNPEVPSMHDKLLKRIILSSLTGNLAMFLGHEKFGYQVISTDQAVN
LHPSCSLLNYGSKPEWVVFTEILSIPNQYLVCVTAVDHDALYSVHSMSFIHQLEKHKLQI
KVISGLGHNLLRRFCGKYGQNQHRIISHLKEECRDDRITVEINFKNNEVVLFATRQDIEK
VFCIVNGALECEAKMLRNECLERRLFPGRPGSSPLALFGSGAEIKHLELGKRYLTVEVLH
QNAHDINDKELIFLVGSLIPGVANFHKSAGNFRIASDETKWGKLTFLKPEDAEEAVLKLN
GIEFHGSSLKVVPVCSSDNRGLPFPAVRARLSWPCNPSRGRAFGTRLLRPREAPIIGPSV
SACEEALIREISSFMPNKSFPGQNFRVEVFPPEENNSMMRATITFDGSLHREAARALDHL
EGSFLPCCQPWQMIRCKHVFHSTLSCPLHVYNVISQEVNSLLESFRSQKGVSYNFEKTDN
GIFRLKLTANATKTIADLRRPLEILMKGNTINHPDLTISAVQLLMSHDGVVHLKSIEQET
GTYILYDRQSLNIKVFGHQDQMATAETKLVHALTELLEKKPLEISLRGHNLPPDLMKKTV
ENFGVDLEGLKKEMPAVNVELHKQRHLLKVWGSKEDKRRVEGMISELITSVKQNALVQLP
SGSVGGSKDKQRVDDNELAQDACPICLCETEDPFELESCGHMFCWACLVDQCESAMKSHD
GFPVCCLKTGCKKPFLIVDLKHLVSNEKLEDLFRASLRTFVESRAGMYRFCPTPDCQSIY
QVAAPDAETKPFVCGACYVEICTKCHLEYHPFMSCEAYKQYKEDPDATLLEWRRGKENVK
NCPSCGYTIEKSEGCNHVECRCGSHICWACLANFRSSEECYGHLRSAHQSFVDIV
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggctcgatctcacgccgaccgccccttccgcccgccggatcggggtccgctaccgccg
caccgctcacagcagcaccgccaaccgcacccgcagtccgccgcgatcctcctccttcgc
gcgggccccgatttctcctccccgcccgcaacggaggtcgacgcgctcgtcgccggcctc
cgccccgacagcctctccgtcttctcctccggccgccacgccgctcgcctcctcttccgc
tccctccctgcggccgcggccgccgcgcgtgacctctggtcgctccgcctcgagggtcgc
cacctcctcaccccgtacctccccgacgccgccctcgccgcgaaggcattccccctaatc
tcctcgctcttcgcctcccacgcctcccgcctcctcgactccgacctcgtttcccgttta
gccgcccgctcatctcagctcgcagcctccgtccagtctgtcaagcaccgcctgcgcgtc
cgccgcagtaacctccgtgacttcgatcagctaaatctccagaggaaaacgctggaggct
gacaaggatttgttagacgctaaaattgccgagtataaagcagcaatgatgtcgatacgt
cgtgcgatgctaagtgggacggatgaagaggaggagggggttgatctgtttgggattgtg
gaaggtgatgatgtggattttgcgagggtgcacacgatgatgctgcgcgagtgcaggcgg
ctcaacgagggactaccaatctatgcataccgtagaaaaattctcaatcacatattcgct
aaccaggttatgatcttaattggagaaactggttctgggaaaagcacacaattggttcag
tatcttgctgactcaggtcttgctgccaacggttcaattgtctgtacccaacctcgaaaa
attgctgctataacgttggcacgtagagtagatgaagaaagcaatggctgctatgcagac
aattttgtgtcgtcatgttcaaccttttccggttctcggggcttcagttcagagatcata
tttggcacagatagttatcttttacatcactgcatgaacgatacgggcctggatggcgtt
tcatacattattgttgatgaagctcatgaaagaagcttgaacactgatcttctcttagct
ttgataaagaaggagctgcttgatagggtggatttgcgactcattataatgtctgccact
gctgatgctaatagactagctgaatacttttatggctgtcaaacattccatgttaaaggg
cgcaattttcctgttgaaattaaatatatcccagatgtatcagtggatgcttccttcaat
actgtaccgaactctctgaatgatgcttgtgctactgcttcctatgtcaatgatgttgta
agggtggtaagtgtgattcacaagaatgaagaagagggtgccatacttgcttttttgaca
tctcaactggaagttgagtgggcctgtgaaaacttcagcgatgcaagtgctgtggtactt
cctatgcatggaaagctttcccatgtagaacagagtcgtgttttcaacagctatcccggt
aagagaaaagttatcttctgcacgaatatggctgaaacgtcactgaccatcaaagaagtg
aagtatgttgttgatcctggactggccaaggagagcagatttgtgcctagtagtggtctc
aatgtgctgaaagtaaattggatttcccaaagttccgctaatcaacgtgctggccgggcc
ggtcgaacaggagcagggaagtgttacaggctttactctgaatctcacttcagaatgatg
gaagtacatcaagaacctgaaatccggaaagttcatcttggcactgctgttctgagaata
cttgctttgggtgttagggatgcacagaattttgagtttgttgatgccccaaatccagaa
gcaatcaatatggctttgaagaaccttgaacaattgggtgctgtcaaatgtaaatgtaat
ttgtttgagctgactgatactggacgctacctggtcaaattgggaattgagccaaggctt
ggcaaaattatgcttgattgctttgattctggtttgaggaaggaaggtgtaattctagct
gctgttatggcaaattctagcagcatattttgtagagtgggcactaatgaggagaaacat
aaagctgaccttcagaaggtccgattgtgtcaccaagatggagatctcttcactttactc
gctgtttataaaaaatgggaggatgggaatggaaacaggaatatgtggtgctggcagaac
agcatcaacgccaagaccatgaggaagtgccaggaaactatatcagagcttgaaaattgt
ctaaagcatgaactcaacattattgtcccaagttattggtgttggaatcctgaggttcct
tctatgcatgataagttgctaaagagaattattctatcatctcttacaggcaatcttgct
atgtttttaggacatgaaaagtttggttaccaggtgatttcgacagatcaggctgtgaac
cttcatccctcatgctcattgctcaattatggcagcaagccagagtgggtggtgtttaca
gaaatcttatcaatcccaaatcagtatttggtatgtgtaactgctgttgatcatgatgcg
ttgtattcagttcattccatgtccttcattcatcaactggagaaacataaactgcagata
aaagtgattagtgggcttggtcataatttattgcgaagattttgtggcaaatatggccaa
aatcaacacaggattatctcacatctcaaggaagaatgcagggatgaccgaataacagtc
gaaattaacttcaaaaacaatgaagttgtgttatttgctacaaggcaggacatagaaaag
gtcttttgcattgttaacggtgctttggagtgtgaagctaagatgttgaggaatgagtgc
ctcgagagaagattatttcctgggaggcctggcagttctcctcttgcattgtttggctcg
ggtgctgaaatcaagcatttggaacttgggaagaggtatctaacagtagaggttctccat
caaaatgctcatgatatcaatgacaaggagcttatttttttggtgggcagtctgatcccc
ggtgtcgctaattttcataaatcagctgggaactttcggatagcctcagatgaaactaaa
tgggggaagcttacattcctcaaacctgaagatgctgaagaagctgtgttaaaattgaac
ggaatagagtttcatggttcctcattaaaagtggttccagtatgttcttctgataatcga
ggattaccatttcctgcggtaagagctagactatcatggccatgtaacccaagcaggggg
cgtgcatttgggacccgtttgctcaggcccagggaagcacccataattggcccttctgtt
tctgcatgtgaagaagcgctgattagagaaatttcttcgttcatgccaaacaagagtttt
cctggacaaaatttccgcgttgaagtcttccctccagaggaaaacaattcaatgatgaga
gcaactataacttttgatggaagtcttcatcgagaggctgcaagagcgctggaccatctt
gaaggaagctttcttccttgttgtcaaccttggcagatgatacggtgcaagcatgtattt
catagtactctgtcctgcccattacatgtttacaatgttatcagccaggaagttaattct
ctgcttgagagcttccgaagccagaaaggtgtgtcttacaatttcgaaaagactgataat
ggtattttccggttaaagctcactgcaaatgccacaaaaacaatagcagatttgagaagg
cctcttgagattttgatgaaaggcaacactataaaccaccctgacctgacaataagtgca
gttcagctacttatgtcccatgatggtgtagtacatttgaaatctattgaacaagaaact
ggtacttacattctttacgacagacaaagtctgaatattaaagtctttgggcaccaagat
cagatggctacagcagagacaaaattggtgcacgcacttacagagctccttgagaagaag
cccctggaaattagtcttcgtggccataacctccctccagacttgatgaagaaaacagta
gagaactttggagttgatctggaaggacttaagaaagaaatgcctgcagtaaatgttgag
ttacataaacagcgacatctacttaaagtttggggcagtaaagaggataagcgaagggtt
gaagggatgatctctgagctgataacctctgttaaacagaatgccctggttcaacttccg
tcagggagtgttggaggaagtaaggataagcaaagggtggatgacaatgagctggcgcag
gatgcgtgccctatttgcttgtgtgagactgaagacccttttgagcttgaatcatgtggg
cacatgttttgttgggcttgcttagtggatcagtgtgaatctgccatgaaatctcatgat
gggttccctgtttgctgcctgaaaactgggtgcaagaagcccttcctcatagttgatttg
aagcacctggtgtctaatgagaagctggaggacctattcagagcttccttgaggacattt
gttgaatctagagcaggaatgtatcgcttctgcccgacacccgattgccaatccatctac
caagtggcagctccagatgcagagaccaagccttttgtctgcggggcttgctatgtcgag
atctgcaccaagtgccatctcgagtatcatcctttcatgtcctgcgaggcttacaagcaa
tacaaggaagacccagacgcgacgctgcttgaatggcgcagagggaaggagaatgtgaag
aactgcccttcgtgtggatacacgatcgagaaatctgagggttgcaaccatgtcgagtgc
aggtgcggcagccacatttgctgggcatgcttggcgaacttcaggagcagcgaggagtgt
tatggccatctcaggtctgcgcaccaatcctttgtggacattgtgtag
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integrated database retrieval system
