Triticum aestivum (bread wheat): 123120563
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Entry
123120563 CDS
T07757
Name
(RefSeq) uncharacterized protein LOC123120563
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123120563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123120563
03019 Messenger RNA biogenesis [BR:
taes03019
]
123120563
04121 Ubiquitin system [BR:
taes04121
]
123120563
Enzymes [BR:
taes01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123120563
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
123120563
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123120563
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123120563
Ubiquitin system [BR:
taes04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123120563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Nup35_RRM_2
PcfJ
zf-UDP
Motif
Other DBs
NCBI-GeneID:
123120563
NCBI-ProteinID:
XP_044396506
UniProt:
A0A3B6MR09
LinkDB
All DBs
Position
5D:complement(255429578..255436911)
Genome browser
AA seq
1135 aa
AA seq
DB search
MMTMSDDGDRTCPLCAEEMDITDQQLKPCKCGYEICVWCWHHIIDMAEKEDTEGRCPACR
TRYDKDRIVKMAATCDRTVADKNTDKKQKTQKVKSKTLTVEAKKHLASVRVIQRNLVYII
GLPANLCNESVLERREYFGQYGKVLKVSVSRPTGAPSQQTATNNGISVYITYAKEEEAIR
CIQAVHNFVLEGKVLRACFGTTKYCHAWLRNMTCGNPDCLYLHDVGSQEDSFTKDEIISA
YTRSRVPQMASSVSQRRAGTVLPPPAEDFSYSAVVSAKHTIKNGTTNTTGQSRLSPPNSS
SGRSTLPPATSWGHRDLNTRTTATEVASSQSLSKSKSEAHSNSLSSSSMISNSRLPSSWN
DDTSTVLKMTEGRQVSERDSLSKTLKPYRPGIAKETQAVTSLESSLDIDFSTIPSAWNDD
EVVASDETSKGSEEKQVVNGKFIPSASSKPTEPGQIGSKSSTSPKNGEAVNSSKQNLADC
VPHSAISGSVLKRDDGESRPGYTEAEKLSVGVTSVTLDSKDTVHSMAESQQLGAVPNTSV
VVPLSQSLKKEQSHLKLAGLSSSENKDPVLSCQSSSDKHLDWSSELQSCRVASPLNDIWN
SSVATDKPHATANTSHISLWSDKEINPTSTSDGRTSGTMLQTRLSSTDNASTMLNGRREG
LGPMYTPDMVSEHSGMRNHQHRALDAARNDNIGSFGNAVSGNKDEGSIISDILSFEFDPW
DESYSTANNFVKMLNESEKNDALFNAPSWKSKGTSNESRFSFARQDNQRNFQDSSFRNCG
SDQNFSLLSQNSHGNSYQNGVAFQSLEEDFSKSNPLAMSDIATAGSSRSKISAPPGFAAP
ARVPPPGFSSQDGLNPPPGFSSGFSSQDMLNHPHGYPHGFPSQAGSNPPHGFSSQAGSNP
PHGFSSQAGSNPSRGFNSGFSSQDGSNNIPPGFSSAFSAGFSSQNGSNQAYGSTFSETRL
LDNLFGSHTNQYQPQISRHTSDIEFIDPAILAVGKGRMPGVSDSGLDLKNAPFPAQLQTS
NNDPRLQLLMQQSMPSHQNLRYTDHVQDAFNPIQNDNYLASRLLPQNHGSLSPYAQMSLQ
QPRNSQLANGHWDGWSDLRRGNNVPMSDMSRMLYPTEANNFHMLGSNEYNRTFGL
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgatgagcgatgacggagaccgcacctgcccgctctgcgccgaggagatggac
atcactgaccagcaactcaagccctgcaaatgtggctacgagatttgtgtctggtgctgg
caccacatcattgacatggctgagaaagaggacacagaggggcgctgccctgcctgccgc
acacgctatgacaaggacaggattgttaagatggctgccacgtgtgacagaacggtagca
gataaaaatacagacaagaagcagaagacccaaaaggttaagtcaaagacactgactgtg
gaagctaagaagcatctggctagtgtcagagttatccagagaaacctggtctacataatt
ggcctacctgcaaatttatgcaatgagagtgtacttgagcgcagggaatactttggtcag
tatggaaaagttttgaaggtttcagtttctcgtccaactggggctccttcccagcagaca
gcaacaaacaacggtatcagcgtatatattacttatgccaaagaagaagaggccatccgg
tgtattcaggctgtacacaattttgtcttggaagggaaagtgctaagagcatgctttggc
accacgaaatattgccatgcatggctgcggaacatgacatgtgggaatccagattgtctc
tatttgcatgacgtaggcagtcaggaggatagtttcactaaagatgagataatctcagca
tataccaggagtagggttcctcaaatggcgtctagtgtttcccaaagacgtgcaggaact
gtattgcctcctccagcagaggacttctcttacagtgcggtggtttcagccaaacataca
atcaagaatggaacaactaataccacaggccagtcaagactttcacctccaaacagtagt
tcagggaggtccacgcttccaccagctacttcatgggggcatcgtgatttgaacacaagg
acaaccgcgactgaggtggcgtcctcgcaatctcttagtaaatcaaaatcagaggcgcat
agtaattcactttcaagttcttctatgatttcgaattcaagactaccttcttcatggaat
gatgatacaagcacagtactgaaaatgactgaaggacggcaagtatcagaacgagatagt
ttgtctaaaaccttgaagccatatagacctggtattgcaaaggaaacccaagccgtgaca
tcactggagtcttcgttggacatagacttttctacaataccttcagcctggaatgatgat
gaagttgtagcatcagatgagacttcaaaaggaagtgaggaaaagcaagttgtaaatgga
aagtttattccttcagcatcctcaaaaccaacggaaccgggccagattgggtctaagtca
tcaacatcaccaaagaatggcgaagccgtaaacagttccaagcaaaatcttgcagattgt
gtgccacattcagcaatatctggttctgttttaaagagggatgatggtgagagtagacct
gggtacacagaagccgagaagttgtctgttggggtaacttcagtaactttagatagcaaa
gatacagttcatagtatggcagaaagccaacagctgggtgcagttcccaacacttccgtc
gtggtgcctttgagtcaaagtttgaagaaggaacaatctcatttgaagcttgctgggctt
tcatcatcagaaaataaggaccctgtactttcttgtcaatctagttctgataagcatctt
gactggagctcagagctgcaaagttgtcgtgtggcttctcctttgaatgacatatggaat
tcttctgtggccactgataaaccccatgccactgctaacacatcacatatttctttgtgg
agtgataaagaaattaaccctacttcgacaagtgatggtagaacttctggcaccatgctg
caaaccaggttatcttcaactgacaatgcttctaccatgttgaatggacgtcgagagggg
ctaggacctatgtatacacctgatatggtttctgaacattctggtatgcgaaaccaccag
catagagcactggatgcagcaagaaatgataacataggcagttttggcaacgctgtaagt
ggaaataaagacgagggcagcataatttctgatatattgtcttttgagtttgatccatgg
gatgagtcatattcaactgcgaacaattttgttaagatgcttaatgaatctgaaaagaac
gatgcacttttcaacgcaccttcatggaaatcaaaaggcaccagtaatgagtctagattt
tcgtttgctagacaggataaccaacggaacttccaagattcatctttcagaaattgtggc
agtgatcagaattttagcttgctatcccagaattctcatggcaacagctatcagaatggt
gttgcattccaatcgctggaggaagatttttcaaagagcaatcctcttgccatgtcagat
atagcaactgctgggtcttcaaggtctaaaatatctgcacctcctggattcgcggcacca
gctagagtcccgcctcctggattttcatctcaggacgggttgaatcccccacctggattt
tcttcaggattctcatctcaggatatgttgaatcaccctcatggatatcctcatggattt
ccatctcaggctggatctaatccccctcatggattttcatctcaggctggatctaatccc
cctcacggattttcatctcaggctgggtcgaacccgtctcgcggatttaattctggattt
tcatcccaggatgggtctaacaatatccctcctgggttttcttctgcgttttctgctggg
ttttcatcccagaatgggtctaaccaggcatatggctccacattctcagaaactcgtcta
cttgataatctttttggtagccacaccaatcagtatcaacctcagatatctagacacacg
agtgacatagaatttattgatcctgctatattggccgtgggcaaagggcggatgccagga
gttagtgattcagggttggatttgaaaaacgctccttttccagcacaattgcagacatca
aataatgatccaagacttcaactactcatgcagcagagcatgccctctcatcaaaacctc
agatatactgaccatgttcaagatgcattcaaccctattcagaatgataattatctggca
tcccgacttctgccacagaaccatggttctctatccccttatgcacagatgtcactccaa
caacctagaaactcacagcttgcaaatggtcactgggatggctggagtgatttgagacgg
gggaataatgttcccatgtcggacatgtcgaggatgttatatccaactgaagctaacaac
tttcacatgctgggttcaaatgagtataacagaacctttggactttaa
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integrated database retrieval system
