Triticum aestivum (bread wheat): 123120611
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Entry
123120611 CDS
T07757
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123120611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123120611
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123120611
Complex C
U4/U6.U5 tri-SnRNP related factors
123120611
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Gene cluster
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
123120611
NCBI-ProteinID:
XP_044396552
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Position
5D:258481824..258486820
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AA seq
392 aa
AA seq
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MANRTDPLARSIHGTNPQNLVEKIVRAKIYQSNYWKEQCFGLTAETLVDKAMELDHTGGT
HGGNRRPTPFLCLALKMLQIQPDKEIVVEFIKNEDYKYVRVLGAFYLRLTGTVADVYQYL
EPLYNDYRKIRQKLSDGKFTLTHVDEFIDELLTKDYSCDTALPRIQKRWILEASGTLEPR
RSALEDDFEEEEEDKEDGQPMDVDEPNTHEKDHLRGRSPTKERDRERERDRDRKHERHHR
DRDHDRDRDHGDYGRGRERDRDRDRGRERDRERDRERDRHRIRDDDYNRDRDRDGRERER
RDRDRGRHRSRSRSRSRDRRERDREVGELRKRRGRGSASPPRGRADDGPREEPKKRKEKK
EKKGSGKGPDPNDPEIIEMNKLRASIGLGPLK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggaccccctggcccggagcatccacggcaccaacccacagaacctg
gtggagaagatcgtgcgggctaagatctaccagagcaactactggaaggagcagtgcttc
ggcctcacggcggagaccctcgtcgacaaggccatggagctcgaccacaccggcggcacc
cacggcggcaaccgcaggccgacccccttcctctgcctcgccctcaagatgctccagatc
cagcccgacaaggaaatcgtcgtcgagttcatcaagaacgaggactacaagtatgtccgg
gttcttggggccttctacctgcgcctcactggcaccgtcgccgacgtttaccagtacctc
gagccgctctacaacgactaccgcaagattaggcaaaagctcagcgatggaaaattcacg
ctgacacacgttgacgaattcattgacgagctcctgaccaaggactatagctgcgacact
gccctcccccgcattcagaaaagatggatccttgaagcttctggaactctagaacctaga
agaagtgcacttgaagacgattttgaggaagaggaggaagataaggaggatggacagcct
atggacgtagatgagcctaacactcatgaaaaggaccatcttcgtggaagaagccccacc
aaagaacgcgacagggaaagggagagggacagagacaggaaacacgaaaggcatcacagg
gaccgagatcatgacagagatcgggatcacggggactatggaagaggccgggaaagagat
cgagacagagatagaggccgtgaaagagatagagagagggatagggaacgagaccgtcac
cgcatcagagatgatgactacaaccgagatcgtgaccgggatggcagggaaagggaacgc
cgggacagagaccgtggcaggcacaggagccgctcaaggagcagaagccgggatcggcgt
gaaagagaccgtgaagtgggagagctccgtaagagacgtggccgtggtagtgccagtcct
cctcgagggcgtgccgatgatggtccgagggaggagcctaagaagagaaaggaaaagaaa
gagaagaagggcagcgggaagggtccagatcctaatgatccagagattatagagatgaac
aagctgcgcgcatcgatagggttgggaccactgaagtaa
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