Triticum aestivum (bread wheat): 123120719
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Entry
123120719 CDS
T07757
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123120719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123120719
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123120719
mRNA cycle factors
Common to processing body (P body) and stress granule
123120719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TSNAXIP1_N
Motif
Other DBs
NCBI-GeneID:
123120719
NCBI-ProteinID:
XP_044396642
LinkDB
All DBs
Position
5D:264787852..264795067
Genome browser
AA seq
1027 aa
AA seq
DB search
MTVPMDSTAVPPSRDLVQRLLKKNAELKSHLEKSAQSKVPSDPNIWLQMRENFEKMILAD
HDFCEKHEIEYILWQLHYKRIEEFRHHISSAGAAASQNGKNNANPDRIKRIKSAFRSFLS
EASGFYHDLMFKIKSNYDLPLGHFSESPENAGNPGKNDKRTADAKKALISCHRCLIYLGD
LARYKGMFGDADSVRREYNAASNYYKEAASICPSSGNPHHQLAILASYSGNEVVAVYRYF
RSLAADTPFSTARDNLILAFEKNRQGYAQLPSNNKVAIARTLPPRSAGRGRGRGEIRFQP
KDVNTEAASKEREQSIPDTLKSFFVRFVRLNGILFTRTSLETFEELFDVVINDLKILLSS
GPNEEFHFGSDAAENALVIVRLVAILIFTVHNVKKEPDNQSYAEIVQRRVLLQNAFTAAF
EFVGHILKRCSELRDIASSFYLPAIVVYIEWLACHPELAADSEMDEKHANARSFFWNQCV
LLMNKLILTDLASIDGDDDEACFFDMGVYEEGETGNRLALWEDFELRGFSPLVPAHIILD
FSSKHTFGSDGSTKEKKARAQRILSAGKALLNFVQIDQLRIYFDPSSRKFVVAKEPPVFE
AATSTHRSRNAPETNAVELEHEIGNKFDAVATNLGAIQSGVQLCSEGEDDEEIVFKPTAS
EKLPKVLTELPVNGYIQPLQMSTAGWPTIGGPVAIQSTASASGPGNCNVIESLPMSSGGW
AFNGRQEAISSNVSMSTTYEFVQPVEMATSSWASNGAPLVGPLNTMPTFSAAISDPRVSA
AMVPHFGSPDYSKLLLEQEKLLMRGLNNVHLAGNGFPEQRFQGGLQSMVYSPHVSVESVR
NNTSLMHNQVKATEETIPSTSDSIVPSVAASGGMTINLTDAPVAVSKKNPVSRPSRPVGP
PPGFNHITPKRHDDIMPFEKLQHQQIDDYSWLDGYQPSMERVHNSKAIYPDVATTSSAFT
TPFPFPGKQQVSGVHTLGASEKTWHDFHLFDPAKQNMVQNHQQINQHSGQVAEKQPAKPI
GSGRYLV
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgactgttccgatggatagtactgctgttccgccatctcgggacctcgtgcagcgcctc
cttaagaagaatgccgaactcaaaagtcatcttgagaagtcagcacagtccaaagtccca
tcagatcccaacatatggcttcagatgcgtgagaattttgagaaaatgattctggcagat
catgacttctgtgaaaagcatgagatcgagtatattttgtggcagttgcattacaaaaga
atcgaggagttcaggcaccacattagttctgcaggtgcagctgcatctcaaaacgggaag
aacaatgccaaccctgatcgaattaagaggattaaatcggccttcaggagctttctttca
gaagcatcgggcttctatcatgacttgatgttcaagatcaaatccaactacgaccttcct
ctgggtcacttctcggagtctcctgagaatgcaggcaaccctggcaaaaatgataagaga
acagctgatgctaagaaagccctgatatcatgccaccgttgtctcatatatcttggtgat
ttggcccgctataagggtatgtttggtgatgctgattctgtaagacgtgaatataatgcg
gcttctaattactataaggaggcagcttcaatctgcccttccagcggcaacccacaccat
cagcttgcaatattagcttcttactctggcaatgaggtggtggctgtctacagatacttt
cgaagcttagctgcagacactcccttctccacagcacgggacaacttgattcttgctttt
gagaagaatcgccagggctatgcacagctgccaagcaacaacaaagttgcaattgctagg
acattacccccacggtcagctggtaggggcagaggacggggcgaaataaggtttcagccc
aaggatgttaatactgaagcagcttcaaaagagcgagagcaaagtattcctgatacactg
aagtccttctttgtacggtttgttaggctcaatggaattcttttcacaaggactagtttg
gaaacatttgaggaactgtttgatgtggtcatcaatgatctgaaaattctcctctcttct
ggtccaaatgaagagttccattttggttctgatgctgcagagaacgcattagttattgtt
cgacttgttgcaatccttatattcacagtgcacaacgtgaaaaaggaaccagataaccag
tcatatgctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgctttt
gagtttgttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttc
tatcttccagccattgtggtctacatcgaatggctggcatgccatccggagttagctgct
gattcggagatggacgagaagcatgcgaatgctcgatctttcttctggaaccagtgtgtc
ttgcttatgaataagctcatccttacagaccttgcgtccattgatggtgatgatgatgag
gcttgcttttttgatatgggcgtgtatgaagagggtgaaactggcaatcgacttgcattg
tgggaagattttgaattaaggggattttcccccttggtgcctgcacatattatcttggat
ttctcaagcaagcacacatttggaagtgatggtagcaccaaggagaagaaagcacgggca
caacggatactttctgcagggaaggctctactcaattttgtccagattgatcaactgaga
atatattttgacccatcttcaagaaagtttgttgtggccaaggagcctcctgtttttgaa
gctgccacctctactcatagatctcgcaatgcacctgaaacaaatgctgttgagctggaa
catgaaattggtaacaaatttgatgcagtggcaactaatcttggagcaatacagtcggga
gtacagttgtgttcagagggagaagatgatgaagaaattgttttcaaacctacagcgtcc
gagaagctcccaaaagtacttaccgaactacccgttaatggatatatccagcctctacaa
atgtctactgctgggtggccaacaattggcggaccagttgctattcagagtactgcatct
gcatcaggtcctggaaactgtaatgttattgagtcacttcccatgtcttctggtggttgg
gctttcaatggtaggcaagaggctatttctagcaatgtttcaatgtcgacaacttacgaa
tttgtgcagcctgttgagatggctacttccagctgggcaagcaatggtgcaccacttgtt
ggccctctgaacacaatgcctactttctcagctgccatctctgatccgcgtgtatctgca
gcaatggttccacattttggcagcccagattattcaaaattgctccttgaacaagaaaaa
ctcttaatgaggggattaaataatgttcatttggctggaaatggatttcctgagcagagg
tttcagggtggattacagtcaatggtatattctccacatgtatctgttgaatctgtgcgc
aacaatacaagtttgatgcataatcaggtgaaagcgactgaagaaaccatcccatccact
tctgattcaattgtaccatcagtagcagcatctggtgggatgacaatcaatctcactgat
gcacctgtagctgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcct
cctccaggatttaaccacatcactccaaaacgccatgatgatattatgccatttgagaag
ctgcagcaccaacagatcgatgattacagctggctggatggctaccagccatcaatggaa
cgtgttcataactcaaaagctatttatcctgatgttgccactaccagcagtgcattcacc
actcccttccctttccctgggaaacagcaggtttctggggtgcacaccttaggggccagt
gagaaaacatggcatgatttccacctttttgaccctgcaaagcagaatatggttcaaaac
caccaacaaattaatcagcatagtggtcaagtggctgaaaagcagccggcaaaacctatc
ggatctggccgttatcttgtgtga
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