Triticum aestivum (bread wheat): 123121808
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Entry
123121808 CDS
T07757
Name
(RefSeq) pre-mRNA-processing protein 40C-like isoform X1
KO
K12824
transcription elongation regulator 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123121808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123121808
Spliceosome [BR:
taes03041
]
Complex A
U1 snRNP components
U1 related factors
123121808
Complex B
123121808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
123121808
NCBI-ProteinID:
XP_044397809
LinkDB
All DBs
Position
1B:323868784..323879268
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AA seq
1046 aa
AA seq
DB search
MATPEVVASDAAHPQPDEPSRAVEAAPVAEPEEASDLGAVAAVPAVEEVAAGDAPPAPTP
TSTSNAAVPPPPASPASTAAPGPPRPQFAGSPAYMSPPAPAFSYNVLPRAPLPQHMGSGL
AHQQLASAPAPMARPMPPAALQPPAPRQYFGNRPSFSYNVVSHANASLPTGQQFQLDTRT
NHAVQVPMFAPPASLQPPAPGQLPRPGAPFPGPMTPNPPASIRLPFPVPPRTPNILYGAN
PQQGNLDVGASKSDAPSAPEVSPHTVQSLPPRPEGFGAVGGSAPGQRPSNLSTPPSLLQR
PTGPAPSLPQTSPSGAAPGAVPRATQQQFYPSYPSAPGNPPQPLWGYPPQPTGFQQAPFH
SYPPGSLGPLGTPMVGTSSVTTSLPNIQPPGITTGDPKEQPSINPGCVQSIHTSVEQHPT
GLEDRSTAGVQDSDTWSAHKTEAGVLYYYNALTGESTYQRPLGYKGELEKVAAQPVPASW
DKIAGTDWSIVTTSDGKKYYYDNKQKVSSWQLPPEVAELNKNADSGNLKGSSTSLQDAGT
VANKGEASGEISTPAIQTGGRDSLPLRQTVAPASPSALDLIKKKLQDAGAFSVSSPLATP
SSSASELNGSKPADGAPKEQQGSKNGEKSKDNNGNENMSDSSSDSDDEEHGPSKEDCIRE
FKKMLKERGVAPFSKWEKELPKIVFDSRFKAIPSHSTRRAIFDHFVRTRADEERKEKRAA
QKAAVEAYKQLLEEASEGIDSKTGYQDFERKWGADPRFAALDKKEREALFKEKVRALEEK
VQSARNAVITDFKSMLRECKDIIPTSRWTKVKENFRSDPRYIAVKHEERENAFNEYIAEL
KSAEWEVEQAAKAKVDEQAKLRERERETRKRKEREEQEMERVKLKIRRKDATSSYQALLV
ETIKDPKASWTESKPKLEKDPQGRAVNPDLGQGEAEKLFREHVKDLYERCVRDFRALLSE
AIAPEAATRTTEGGKTLVISWSEAKDLLRSDPRYSKVSSKDRESIWWRYADDMVRKLKQP
DTEKPDTNARQQQRQQRRSFDPPRRR
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggaggtggtcgcctccgacgctgcccacccgcagccagacgagccttct
cgggctgtggaagctgccccagtggcggaaccagaggaagcatccgatcttggcgccgtc
gcggcggtcccagcggtggaagaggtggcagctggggatgccccgcccgctcccactccg
acctccacctccaatgccgcagtgccaccgccgcctgcttcccctgcctccactgccgct
ccagggccgccgcggccgcagttcgctggctcgccggcgtacatgtcgcctccggcgccc
gcgttctcttacaacgttctgcccagggcgccgctcccgcagcatatgggcagcggtttg
gcccaccagcagctagcttccgcaccggctccgatggctcgtccaatgcctccagcggct
ctccagccaccagctccacggcagtattttgggaacaggccttctttctcatataatgta
gtctcacatgccaatgctagcctgcctactggtcagcagtttcaacttgacactaggaca
aaccatgctgtccaagtccctatgtttgctccaccagcatccttgcaacctcctgctcct
gggcaattgcctcgcccaggtgcaccattccctggacctatgacaccaaatcctcctgca
tctattcggttgccatttccagtgccacccaggacgcccaatattctttatggtgcaaac
ccacagcagggtaacctggatgttggtgcttccaagtcggatgccccaagtgccccagag
gtaagtccccatacagtgcagtcactgccacctcgtcctgagggatttggggctgttggg
ggttctgcacctggacaacgtccttcaaacttgtcaactccaccaagtctccttcagagg
cctacaggtccagccccatctttgcctcaaacatcgccatcaggtgctgcaccaggtgct
gttccacgggcaactcagcaacagttttatccatcctatccttcagcgcctggtaatcca
cctcaacctttatggggatatcctccacaacctactggctttcagcaggctcccttccat
tcatatccaccgggctctcttggacctcttggtacaccaatggttggaacttcttctgtg
actacatccttgcccaacatccaaccaccaggcattacaactggtgatcccaaagaacaa
ccatccataaatccaggatgtgtgcagtccattcatacttcagttgaacaacatccaaca
gggctggaggacagaagtacggccggagttcaggattcagatacatggtctgcacacaaa
acagaagccggtgttttatattattacaatgccttgacaggggagtcaacttatcaaaga
ccacttggttataagggggagctcgagaaggttgcagctcaaccagttccagcttcttgg
gacaaaattgctggcacagactggagcatagtaactacaagtgatggaaagaaatattac
tatgacaataaacaaaaggttagcagctggcaacttccgccagaggtggctgaactcaac
aagaatgctgattctggcaacttgaaaggaagttcaacttcactgcaggatgctggcaca
gtagcaaataagggagaggcgagtggtgaaataagtactcctgccatacagacaggtggc
cgtgattcgttgccacttcggcaaacagttgcccctgcatcgccttctgctttggatttg
ataaagaagaaattgcaggacgctggtgctttcagtgtgtcctctcctcttgctactcct
tcatctagtgcatctgagttgaatggatctaaaccagctgatggtgcacctaaggaacag
caaggttcaaaaaatggtgagaaatcaaaggataacaatggcaatgaaaatatgtcagat
tcctcttcagattcagatgatgaggaacatggaccaagtaaagaggattgtattcgtgag
tttaagaaaatgctaaaggaacgaggagtagcaccattttcaaagtgggagaaggaactg
ccaaaaatagtattcgattcacgatttaaggctattccaagtcactcgactagacgggct
atatttgaccactttgttcggacacgtgctgacgaggaacgaaaagagaagagagctgct
cagaaggccgccgttgaggcatataaacagctattagaagaagcatctgagggcatcgat
tcgaaaacaggttaccaggatttcgaaagaaaatggggtgctgacccaagatttgcagcc
ttggataaaaaagaaagggaggctcttttcaaggagaaggtgagggctcttgaagagaaa
gttcaatcagcgcgaaatgctgtcataactgacttcaaatcaatgcttcgagaatgtaaa
gatataatcccaactagccgttggaccaaagtgaaagaaaatttccggagtgatccaagg
tacatagctgtaaagcacgaagagagagagaatgcttttaatgaatacatagcagaactt
aaatcagctgaatgggaagtggagcaagctgcaaaggccaaagtggatgaacaagccaaa
ttaagggagagggaacgcgaaactcgcaaaaggaaagaaagggaagagcaggaaatggag
agagtaaaattgaagatccgaagaaaagatgccacgtcttcgtatcaggctttgcttgtt
gaaactataaaagatccaaaggcatcatggactgaatccaaaccaaaacttgagaaggat
ccgcaaggtcgtgctgtaaatccggacttaggccaaggtgaggccgagaagttattccgt
gaacatgtcaaggacttatatgagcgttgtgtccgtgacttcagggcacttctgtctgag
gcaattgccccagaagcagcaactcgaacaacggaaggaggaaagactctggttatctct
tggagcgaagcaaaagaccttctaagatcggatccaaggtacagcaaagtgtcaagcaaa
gatcgagagtcaatttggtggcgatatgcggatgatatggtgagaaagctcaaacagccg
gacacggagaaaccggataccaatgccagacaacaacaacgacaacaacgcaggtcattt
gatccgccgaggcggaggtaa
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