Triticum aestivum (bread wheat): 123123097
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Entry
123123097 CDS
T07757
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123123097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123123097
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123123097
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
123123097
NCBI-ProteinID:
XP_044399475
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Position
5D:complement(491072265..491078567)
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AA seq
400 aa
AA seq
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MANLPPSLAAGPSFGAPSPPPLPPPSGSSAAAPPAGGRDRKMVSAEQLVLDLCDPELREN
ALLELSKKREIFQDLAPLLWHSFGTVAALLQEIVSIYPSLSPPTLSPVASNRVCNALALL
QCVASHPDTRIPFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDSEVIGF
LLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDIGLRYICATAERFFAVATVLAQMV
QALAEQPSARLLKHIIRCYLRLTENQRACAALNSCLPTVLKDGTFNNFLLDDNVTRRWLQ
QLLSNMSIAGLGGGSSHTGMGGGSSLGGMGGGGSLGGMGGGGSLGGMGGGGSLGGGMGGG
GSLGGMGGGGSLGGGMGGGGSLGGMGGGGPHGGLDHLMGL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgccgccgtccctcgccgccggcccctccttcggcgcgccctccccgccc
ccgctcccgcccccgtccggctcgtcggccgcggcgccgcccgccggggggagggaccgg
aagatggtgtccgcggagcagctcgtgctcgacctctgcgacccggagctgcgcgagaac
gccctcctcgagctctctaagaagcgagagatttttcaagaccttgctccactgctgtgg
cactcctttggcaccgttgctgcactgctccaggagattgtgtcaatctacccttcactt
tcacctcctactttgtcgccagttgcatcaaaccgtgtctgcaatgcacttgcacttctt
cagtgtgttgcttcacaccctgataccaggatcccgttcttgaatgctcacatcccactg
tacctgtacccgtttctgaatactaccagcaagactagaccttttgagtacttgaggctt
accagcttgggtgttattggtgctcttgtgaaggttgatgattctgaagttattgggttt
ctgcttcaaactgaaataattcctctgtgtctccgtactatggagatgggcagtgaactt
tccaaaacagtggccacctttattgttcaaaagattctgcttgatgacattgggctgcgt
tacatctgcgcgaccgctgagcgtttctttgctgtggccactgttttagcacagatggtc
caggcgcttgctgaacagccgtctgcaagattgctgaagcacataatccgctgctacctc
aggctgacagagaaccagagggcttgtgccgcgctcaacagttgcctccccaccgtgctg
aaggacgggacattcaacaacttccttcttgatgacaacgttacaaggcggtggctccag
cagctgctgagcaacatgtcgatcgccggcttgggcgggggaagctcccacactggtatg
ggcgggggaagctctctcggcggcatgggcgggggaggctctcttgggggcatgggcggc
ggaggctctctcggcggcatgggcggaggaggctctcttggcggtggcatgggaggcggg
ggctctctcggcggcatgggcgggggaggctctctcggcggcggcatgggaggcgggggc
tctctcggcggcatgggtggaggaggccctcacgggggcctcgaccacctgatggggcta
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